RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CD55P08174 381 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 UMPSP11172 480 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 ACADSP16219 412 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF12P17014 697 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 CDAP32320 146 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 RBMXP38159 391 aaKnown RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 ATP4BP51164 291 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 SLC18A1P54219 525 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 UGT2B15P54855 530 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 MRPS34P82930 218 aaKnown RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 RPL18Q07020 188 aaKnown RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 ZNF154Q13106 437 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 BAMBIQ13145 260 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 ARMCX4Q5H9R4 360 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 RFPL4BQ6ZWI9 263 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 NANOGNBQ7Z5D8 188 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 AKR7LQ8NHP1 331 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 VANGL1Q8TAA9 524 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 MPP4Q96JB8 637 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 GPA33Q99795 319 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 PRSS27Q9BQR3 290 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 MEPEQ9NQ76 525 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 CYSLTR2Q9NS75 346 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-207ENST00000468385 KLHL21Q9UJP4 597 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 UGT2A1Q9Y4X1 527 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 AUP1Q9Y679 476 aa11.04□□□□□ -0.64
PTPN7-207ENST00000468385 A0A1W2PRG6 482 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 TRAPPC13A5PLN9 417 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 MCIDASD6RGH6 385 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 ERLIN1O75477 346 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 IGHMP01871 453 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 LIPAP38571 399 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 SEC61A1P61619 476 aaKnown RBP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 PSG4Q00888 419 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 ARMC4Q5T2S8 1044 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 DLEU7Q6UYE1 221 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 CROCCP2Q86T23 111 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 HDAC2Q92769 488 aaKnown RBP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 TAF15Q92804 592 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 DCLRE1CQ96SD1 692 aaKnown RBP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 EBF4Q9BQW3 602 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 PCDHAC1Q9H158 963 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 KCNN2Q9H2S1 579 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 PATZ1Q9HBE1 687 aaKnown RBP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 MSL2Q9HCI7 577 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 EIF3KQ9UBQ5 218 aaKnown RBP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 CGGBP1Q9UFW8 167 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-207ENST00000468385 EGFL7Q9UHF1 273 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 ZDHHC8Q9ULC8 765 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
PTPN7-207ENST00000468385 A8MXK9 166 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 POLR3GO15318 223 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-207ENST00000468385 ICMTO60725 284 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 NGFP01138 241 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 SBK2P0C263 348 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 CD247P20963 164 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 AQP2P41181 271 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 SLC6A9P48067 706 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 GDI2P50395 445 aaKnown RBP11.02□□□□□ -0.65
PTPN7-207ENST00000468385 DAP3P51398 398 aaKnown RBP11.02□□□□□ -0.65
PTPN7-207ENST00000468385 ERVK-25P63136 954 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 IL13RA1P78552 427 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 FMODQ06828 376 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 SELPLGQ14242 412 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 UNQ6126/PRO20091Q6UXV3 157 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 SPICQ8N5J4 248 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 C11orf65Q8NCR3 313 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 PFN4Q8NHR9 129 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 ABHD4Q8TB40 342 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 DIRC2Q96SL1 478 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 WNT5BQ9H1J7 359 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 INIPQ9NRY2 104 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 TMEM106BQ9NUM4 274 aa11.02□□□□□ -0.65
PTPN7-207ENST00000468385 F5H0A9 414 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-207ENST00000468385 H3BSA7 217 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 CLDN34H7C241 214 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 OR7A10O76100 309 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 MT-ND1P03886 318 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 TSPAN19P0C672 248 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 FUT1P19526 365 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 IDH3AP50213 366 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 MAGOHP61326 146 aaKnown RBP11.01□□□□□ -0.65
PTPN7-207ENST00000468385 PPP1CBP62140 327 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 TNFAIP6P98066 277 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-207ENST00000468385 SLC9A3R2Q15599 337 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 SGCAQ16586 387 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 TMEM155Q4W5P6 130 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 AGKQ53H12 422 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 MTX3Q5HYI7 312 aa11.01□□□□□ -0.65
PTPN7-207ENST00000468385 FAM27BQ5VT28 67 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms