RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	NMNAT3	Q96T66	252 aa		10.64	□□□□□ -0.71
CTNS-205	ENST00000467663	EMC3	Q9P0I2	261 aa		10.64	□□□□□ -0.71
CTNS-205	ENST00000467663	KLHL9	Q9P2J3	617 aa		10.64	□□□□□ -0.71
CTNS-205	ENST00000467663	PLEKHA6	Q9Y2H5	1048 aa		10.64	□□□□□ -0.71
CTNS-205	ENST00000467663	EMC9	Q9Y3B6	208 aa		10.64	□□□□□ -0.71
CTNS-205	ENST00000467663	IGKV3D-15	A0A087WSY6	115 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663		A0A1W2PPR1	153 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	C16orf97	H3BN30	126 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	TRAF3IP2	O43734	574 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	ATE1	O95260	518 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	SLC2A10	O95528	541 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	PLG	P00747	810 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	RAF1	P04049	648 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	IFNGR1	P15260	489 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	MYL12A	P19105	171 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	HSF2	Q03933	536 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	MEST	Q5EB52	335 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	CREB3L2	Q70SY1	520 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	ZBTB46	Q86UZ6	589 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	SPART	Q8N0X7	666 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	OR9K2	Q8NGE7	335 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	HAVCR2	Q8TDQ0	301 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	RNF128	Q8TEB7	428 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	TMEM45B	Q96B21	275 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	OTULIN	Q96BN8	352 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	RASD2	Q96D21	266 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	RNFT2	Q96EX2	444 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	KCNK17	Q96T54	332 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	PARPBP	Q9NWS1	579 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	KLHL13	Q9P2N7	655 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	CLEC4A	Q9UMR7	237 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	ERGIC3	Q9Y282	383 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	CELSR1	Q9NYQ6	3014 aa		10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNS-205	ENST00000467663	AKAP6	Q13023	2319 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	ABCA4	P78363	2273 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	SLC22A23	A1A5C7	686 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	OR6C68	A6NDL8	312 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	FAM183A	A6NL82	134 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	ZNF724	A8MTY0	619 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	DEFB108A	A8MXU0	73 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663		M0R129	80 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	PHYH	O14832	338 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	SMAD9	O15198	467 aa	Known RBP	10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	SIAH2	O43255	324 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	TRMU	O75648	421 aa	Known RBP	10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	OR2T7	P0C7T2	308 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	ATP6V1B1	P15313	513 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	SPI1	P17947	270 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	CRYGS	P22914	178 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	NUDT6	P53370	316 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	RPS7	P62081	194 aa	Known RBP	10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	GLO1	Q04760	184 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	IRF3	Q14653	427 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	STK11	Q15831	433 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	KLHL12	Q53G59	568 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	FCRLA	Q7L513	359 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	GPAT4	Q86UL3	456 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	PROKR2	Q8NFJ6	384 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	OR2T27	Q8NH04	317 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	ROBO4	Q8WZ75	1007 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	LGALS12	Q96DT0	336 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	MED18	Q9BUE0	208 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	MRPL13	Q9BYD1	178 aa	Known RBP	10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	SRXN1	Q9BYN0	137 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	CCDC90B	Q9GZT6	254 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	OR51V1	Q9H2C8	321 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	MARCH7	Q9H992	704 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	ERVK-18	Q9QC07	812 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	AASS	Q9UDR5	926 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	SEC14L4	Q9UDX3	406 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	TMEM14A	Q9Y6G1	99 aa		10.62	□□□□□ -0.71
CTNS-205	ENST00000467663	ALPK2	Q86TB3	2170 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	SMIM31	A0A1B0GVY4	71 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	TMEM129	A0AVI4	362 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	CCDC182	A6NF36	153 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	KHDRBS3	O75525	346 aa	Known RBP	10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	IGHA1	P01876	353 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	TFAP2A	P05549	437 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	SBK2	P0C263	348 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	HLA-DOB	P13765	273 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	PPP3CB	P16298	524 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	AGTR1	P30556	359 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	GSTT1	P30711	240 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	ALDH3B2	P48448	385 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	ZNF133	P52736	654 aa	Predicted RBP	10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	BID	P55957	195 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	CLRN1	P58418	232 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	EMX1	Q04741	257 aa	Predicted RBP	10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	RASGEF1B	Q0VAM2	473 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	HIST3H3	Q16695	136 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	DEFB113	Q30KQ7	82 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	BEND4	Q6ZU67	534 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	C22orf34	Q6ZV56	151 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	KCTD8	Q6ZWB6	473 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	KDM8	Q8N371	416 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	ACBD7	Q8N6N7	88 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	CYB561A3	Q8NBI2	242 aa		10.61	□□□□□ -0.71
CTNS-205	ENST00000467663	NOXO1	Q8NFA2	376 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms