RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 LINC00523Q86TU6 105 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 LHFPL3Q86UP9 236 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 C6orf223Q8N319 242 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 LIX1Q8N485 282 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF557Q8N988 423 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TTC29Q8NA56 475 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 FBXL13Q8NEE6 735 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 PROKR2Q8NFJ6 384 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 OR9G4Q8NGQ1 327 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 OR9G1Q8NH87 305 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF596Q8TC21 504 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 FANK1Q8TC84 345 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CXorf40AQ8TE69 158 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CAPSLQ8WWF8 208 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 GIMAP1Q8WWP7 306 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ACOT11Q8WXI4 607 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CERS2Q96G23 380 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TSG101Q99816 390 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM246Q9BRR3 403 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ANKRD60Q9BZ19 345 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ROGDIQ9GZN7 287 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 IL22Q9GZX6 179 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 C20orf85Q9H1P6 137 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 NEUROG2Q9H2A3 272 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 RANBP3Q9H6Z4 567 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TDRD3Q9H7E2 651 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 C8orf33Q9H7E9 229 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 SIAEQ9HAT2 523 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 LZTFL1Q9NQ48 299 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 PXMP2Q9NR77 195 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 SAMSN1Q9NSI8 373 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 MYEF2Q9P2K5 600 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 UXTQ9UBK9 157 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ING4Q9UNL4 249 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ASF1AQ9Y294 204 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TP53TG5Q9Y2B4 290 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 RHBDD3Q9Y3P4 386 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 LRP4O75096 1905 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 KIF27Q86VH2 1401 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 FANCIQ9NVI1 1328 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 KCNE1BA0A087WTH5 132 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM150BA6NC51 233 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 GABRR3A8MPY1 467 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 C12orf71A8MTZ7 269 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 C12orf77C9JDV5 145 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF701M0R085 212 aaPredicted RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 M0R3G1 203 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 AIREO43918 545 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF780AO75290 641 aaPredicted RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 EIF3GO75821 320 aaKnown RBP eCLIP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 FLOT1O75955 427 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CLPXO76031 633 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 KLF8O95600 359 aaPredicted RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CLIC3O95833 236 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CSTAP01040 98 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 IGLV3-19P01714 112 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 SERPINE2P07093 398 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CRYGCP07315 174 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ACSM4P0C7M7 580 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 UBCP0CG48 685 aaKnown RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 SRMP19623 302 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 MSR1P21757 451 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CD82P27701 267 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 BMI1P35226 326 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 SLC1A2P43004 574 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 NPBWR2P48146 333 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ETV1P50549 477 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 SSR4P51571 173 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CRISP1P54107 249 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 UGT2B15P54855 530 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 APOC4P55056 127 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 DLX1P56177 255 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 IRX3P78415 501 aaPredicted RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ADARB1P78563 741 aaKnown RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 TGFBR3Q03167 851 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF763Q0D2J5 394 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ECH1Q13011 328 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 SF3A2Q15428 464 aaKnown RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 NKAIN1Q4KMZ8 207 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 AADACL4Q5VUY2 407 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM71E1Q6IPT2 247 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ANKRD26P1Q6NSI1 321 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 C16orf87Q6PH81 154 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CNIH2Q6PI25 160 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 TMIGD1Q6UXZ0 262 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF620Q6ZNG0 422 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ABHD12BQ7Z5M8 362 aaPredicted RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 CMTM1Q8IZ96 169 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 JAGN1Q8N5M9 183 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 LYPD6BQ8NI32 183 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF502Q8TBZ5 544 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 DTX3LQ8TDB6 740 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 FGF14Q92915 247 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 MED8Q96G25 268 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 RNF185Q96GF1 192 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 JSRP1Q96MG2 331 aaPredicted RBP1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 OR5B12Q96R08 314 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 ARHGDIGQ99819 225 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 RARRES2Q99969 163 aa1.39□□□□□ -2.19
GTF3C3-209ENST00000466862 UCK2Q9BZX2 261 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms