RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 NR2C1P13056 603 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 GIFP27352 417 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 RPL4P36578 427 aaKnown RBP18.67■□□□□ 0.58
LIME1-203ENST00000465591 RAP1BP61224 184 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 RAP1AP62834 184 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 PSG4Q00888 419 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 HSF2Q03933 536 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 PLP2Q04941 152 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 ENDOGQ14249 297 aaKnown RBP18.67■□□□□ 0.58
LIME1-203ENST00000465591 ALKBH6Q3KRA9 238 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 RGS7BPQ6MZT1 257 aaPredicted RBP18.67■□□□□ 0.58
LIME1-203ENST00000465591 RRM2BQ7LG56 351 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 HIPK1Q86Z02 1210 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 ZNF786Q8N393 782 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 OR52J3Q8NH60 311 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 BCAS4Q8TDM0 211 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 UBASH3BQ8TF42 649 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 PYURFQ96I23 114 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 POM121L2Q96KW2 1035 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 SOX7Q9BT81 388 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 WNT5BQ9H1J7 359 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 CCNB1IP1Q9NPC3 277 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 IL20RAQ9UHF4 553 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 TMEM5Q9Y2B1 443 aa18.67■□□□□ 0.58
LIME1-203ENST00000465591 LOC100509620A0A075B734 347 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 A0A1W2PPL8 197 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 SLC22A23A1A5C7 686 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 ARPC2O15144 300 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 HPXP02790 462 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 NAT2P11245 290 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 WNT5AP41221 380 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 UCP2P55851 309 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 SAMD4BQ5PRF9 694 aaKnown RBP18.66■□□□□ 0.58
LIME1-203ENST00000465591 ELFN2Q5R3F8 820 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 CYB5R2Q6BCY4 276 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 UGT2A3Q6UWM9 527 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 RASD2Q96D21 266 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 KCNN2Q9H2S1 579 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 MAGEL2Q9UJ55 1249 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 DNHD1Q96M86 4753 aa18.66■□□□□ 0.58
LIME1-203ENST00000465591 CUBNO60494 3623 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 IGLV3-9A0A075B6K5 115 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 A0A1W2PPW3 197 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 LRP5LA4QPB2 252 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 GMNNO75496 209 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 NCR1O76036 304 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 PTHP01270 115 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 LCKP06239 509 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 ERCC1P07992 297 aaPredicted RBP18.65■□□□□ 0.58
LIME1-203ENST00000465591 CST2P09228 141 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 ZNF250P15622 560 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 CCNOP22674 350 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 STOMP27105 288 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 APLNRP35414 380 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 RIN1Q13671 783 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 TMEM255AQ5JRV8 349 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 OTPQ5XKR4 325 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 ZNF101Q8IZC7 436 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 DEFB107AQ8IZN7 70 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 OR1J2Q8NGS2 313 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 FNDC8Q8TC99 324 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 MSI2Q96DH6 328 aaKnown RBP18.65■□□□□ 0.58
LIME1-203ENST00000465591 RSRC1Q96IZ7 334 aaKnown RBP18.65■□□□□ 0.58
LIME1-203ENST00000465591 ZNF570Q96NI8 536 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 ZNF416Q9BWM5 594 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 OR2H1Q9GZK4 316 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 MS4A5Q9H3V2 200 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 EMC7Q9NPA0 242 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 POLE4Q9NR33 117 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 GRHPRQ9UBQ7 328 aa18.65■□□□□ 0.58
LIME1-203ENST00000465591 TEX13CA0A0J9YWL9 993 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 LILRA1O75019 489 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 NDUFB2O95178 105 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 APEHP13798 732 aaKnown RBP18.64■□□□□ 0.57
LIME1-203ENST00000465591 CTLA4P16410 223 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 ZNF23P17027 643 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 IL2RGP31785 369 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 TRIP10Q15642 601 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 ZNF774Q6NX45 483 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 FITM2Q8N6M3 262 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 ICA1LQ8NDH6 482 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 GTF3AQ92664 365 aaKnown RBP18.64■□□□□ 0.57
LIME1-203ENST00000465591 NSMCE2Q96MF7 247 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 GPX7Q96SL4 187 aaPredicted RBP18.64■□□□□ 0.57
LIME1-203ENST00000465591 NRIP3Q9NQ35 241 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 TAAR3PQ9P1P4 343 aa18.64■□□□□ 0.57
LIME1-203ENST00000465591 PRSS37A4D1T9 235 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 C5orf49A4QMS7 147 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 MSR1P21757 451 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 COL8A2P25067 703 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 RAD52P43351 418 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 GZMKP49863 264 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 KRR1Q13601 381 aaKnown RBP18.63■□□□□ 0.57
LIME1-203ENST00000465591 ZER1Q7Z7L7 766 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 SYNPRQ8TBG9 265 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 MDFIQ99750 246 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 BCL2L14Q9BZR8 327 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 LRMDAQ9H2I8 198 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 COL6A5A8TX70 2615 aa18.63■□□□□ 0.57
LIME1-203ENST00000465591 SVEP1Q4LDE5 3571 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms