RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 FAIM2Q9BWQ8 316 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 TMEM59Q9BXS4 323 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 TPK1Q9H3S4 243 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 CLMPQ9H6B4 373 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 SYNDIG1Q9H7V2 258 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 MRPL40Q9NQ50 206 aaKnown RBP2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 RPRD1BQ9NQG5 326 aaKnown RBP2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 ZNF331Q9NQX6 463 aaPredicted RBP2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 DIABLOQ9NR28 239 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 RMND1Q9NWS8 449 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 PAQR5Q9NXK6 330 aaPredicted RBP2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 TAS2R7Q9NYW3 318 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 PSMC3IPQ9P2W1 217 aaPredicted RBP2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 XCL2Q9UBD3 114 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 GNPTGQ9UJJ9 305 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 GGA2Q9UJY4 613 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 PSME2Q9UL46 239 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 NSD2O96028 1365 aa2.45□□□□□ -2.02
HMGXB4-205ENST00000464480 TTC41PQ6P2S7 1318 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 WDR19Q8NEZ3 1342 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ARHGAP31Q2M1Z3 1444 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 GTF3C1Q12789 2109 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 KIR2DL5BA0A0G2JN68 375 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 KIR2DL5BA0A0G2JPC4 375 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 LOC105371267A0A1B0GV96 52 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 HEATR9A2RTY3 570 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 NKX2-6A6NCS4 301 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CENPBD1B2RD01 187 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ZNF879B4DU55 563 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CCL21O00585 134 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 GOSR2O14653 212 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 GATCO43716 136 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CA11O75493 328 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 WBP4O75554 376 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 IGHV2-5P01817 119 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 SERPIND1P05546 499 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CSF3P09919 207 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 UQCRFS1P1P0C7P4 283 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 GKN3PP0CG01 181 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 PSG2P11465 335 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ANXA8P13928 327 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 KITLGP21583 273 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 BMI1P35226 326 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 PHBP35232 272 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 SLC1A1P43005 524 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 GPR6P46095 362 aaPredicted RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 NPBWR2P48146 333 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 SMARCB1Q12824 385 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 PPIL2Q13356 520 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CCDC58Q4VC31 144 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ZCWPW2Q504Y3 356 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 COA6Q5JTJ3 125 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CLVS2Q5SYC1 327 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ANXA8L1Q5VT79 327 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 RNASEKQ6P5S7 137 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CNIH2Q6PI25 160 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 TMEM107Q6UX40 140 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 H2AFVQ71UI9 128 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 TRMT10CQ7L0Y3 403 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 BZW1Q7L1Q6 419 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ZNF429Q86V71 674 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ERO1BQ86YB8 467 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 SYCE1Q8N0S2 351 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 TTC5Q8N0Z6 440 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 KIR2DL5AQ8N109 375 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 OR2L3Q8NG85 312 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 OR7G1Q8NGA0 311 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 OR2G3Q8NGZ4 309 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 KIR2DL5BQ8NHK3 375 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ANGPTL6Q8NI99 470 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 DTX3LQ8TDB6 740 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 MCOLN3Q8TDD5 553 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 SDR42E1Q8WUS8 393 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 RASD2Q96D21 266 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 OLFM3Q96PB7 478 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CENPKQ9BS16 269 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ILKAPQ9H0C8 392 aaPredicted RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 MRM3Q9HC36 420 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 NEK6Q9HC98 313 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 ZFP14Q9HCL3 533 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 GID8Q9NWU2 228 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 SLC25A37Q9NYZ2 338 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 IL37Q9NZH6 218 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 NUP50Q9UKX7 468 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 PACSIN2Q9UNF0 486 aaPredicted RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 NEU3Q9UQ49 428 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 FAM32AQ9Y421 112 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 COMMD3-BMI1R4GMX3 469 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 KIF24Q5T7B8 1368 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 FRMPD3Q5JV73 1810 aa2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 VIRMAQ69YN4 1812 aaKnown RBP2.44□□□□□ -2.02
HMGXB4-205ENST00000464480 CEP162Q5TB80 1403 aa2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 PRRC2AP48634 2157 aaKnown RBP2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 TRBV6-6A0A0A6YYG2 114 aa2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 A0A0B4J2A0 478 aa2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 NCF1BA6NI72 391 aaPredicted RBP2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 FAM166BA8MTA8 275 aa2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 NCF1CA8MVU1 366 aaPredicted RBP2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 MIF4GDA9UHW6 222 aaKnown RBP2.43□□□□□ -2.02
HMGXB4-205ENST00000464480 TMEM114B3SHH9 223 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms