RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FOXB1Q99853 325 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 JAM3Q9BX67 310 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 NELFAQ9H3P2 528 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 SIAEQ9HAT2 523 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 PCNX1Q96RV3 2341 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 PTGES3LE9PB15 166 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 SELENOFO60613 162 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 KRT33AO76009 404 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 APOL3O95236 402 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 TNFAIP8O95379 198 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 CDK1P06493 297 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 LYNP07948 512 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 NPR2P20594 1047 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 DCKP27707 260 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 SH3BGRP55822 239 aaPredicted RBP12.59□□□□□ -0.39
COL6A1-202ENST00000463060 HIST1H3AP68431 136 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 ENDOGQ14249 297 aaKnown RBP12.59□□□□□ -0.39
COL6A1-202ENST00000463060 IRF3Q14653 427 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 P2RY6Q15077 328 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 MEP1BQ16820 701 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 OTPQ5XKR4 325 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 BEND4Q6ZU67 534 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 MRGPRGQ86SM5 289 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 FJX1Q86VR8 437 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 CDC20BQ86Y33 519 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 SLC22A24Q8N4F4 322 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 OR51G2Q8NGK0 314 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 SMAP2Q8WU79 429 aaPredicted RBP12.59□□□□□ -0.39
COL6A1-202ENST00000463060 IPCEF1Q8WWN9 437 aaPredicted RBP12.59□□□□□ -0.39
COL6A1-202ENST00000463060 HTRA1Q92743 480 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 INTS14Q96SY0 518 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 COPS4Q9BT78 406 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 YIPF3Q9GZM5 350 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 SEC61A2Q9H9S3 476 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 ERVK-18Q9QC07 812 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 CYB5R1Q9UHQ9 305 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 DIMT1Q9UNQ2 313 aaKnown RBP12.59□□□□□ -0.39
COL6A1-202ENST00000463060 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
COL6A1-202ENST00000463060 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 A0A1W2PPL8 197 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 IRGMA1A4Y4 181 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 TRIM64CA6NLI5 447 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF593O00488 134 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 LRRTM2O43300 516 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 MRPS14O60783 128 aaKnown RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 FADS2O95864 444 aaKnown RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ALOX5APP20292 161 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 MSR1P21757 451 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 BMP5P22003 454 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 NAA10P41227 235 aaPredicted RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ENTPD1P49961 510 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 HCCSP53701 268 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 PIGFQ07326 219 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 GABRA6Q16445 453 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 SGCAQ16586 387 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ANKRD16Q6P6B7 361 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 AHSA2Q719I0 299 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 SHFQ7M4L6 423 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ERI1Q8IV48 349 aaKnown RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 OR1K1Q8NGR3 316 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 OR2T27Q8NH04 317 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 OTOSQ8NHW6 89 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 CCDC120Q96HB5 630 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 TMEM80Q96HE8 168 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 CNN2Q99439 309 aaKnown RBP12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 CDCA4Q9BXL8 241 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 TAS2R16Q9NYV7 291 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF224Q9NZL3 707 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 KCNG2Q9UJ96 466 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 BLOC1S6Q9UL45 172 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 PCDHGB1Q9Y5G3 927 aa12.58□□□□□ -0.4
COL6A1-202ENST00000463060 DVL2O14641 736 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 SEC14L2O76054 403 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 HLA-DQA2P01906 255 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 MRPL3P09001 348 aaKnown RBP12.57□□□□□ -0.4
COL6A1-202ENST00000463060 CST2P09228 141 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 B4GALT1P15291 398 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 CHRNB4P30926 498 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 RPS27P42677 84 aaKnown RBP12.57□□□□□ -0.4
COL6A1-202ENST00000463060 CDH15P55291 814 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 SFRP5Q5T4F7 317 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF684Q5T5D7 378 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 C9orf135Q5VTT2 229 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF813Q6ZN06 617 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 PRSS48Q7RTY5 328 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 SKA3Q8IX90 412 aa12.57□□□□□ -0.4
COL6A1-202ENST00000463060 SLC35F2Q8IXU6 374 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms