RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 B3GALNT1O75752 331 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 GLCEO94923 617 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR6A2O95222 327 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 FARS2O95363 451 aaKnown RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 AKT2P31751 481 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 CDNFQ49AH0 187 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 PDSS1Q5T2R2 415 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OVCH2Q7RTZ1 564 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 GVQW1Q8N7I0 195 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR51A2Q8NGJ7 313 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 SLC2A12Q8TD20 617 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 PMM1Q92871 262 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 RNF215Q9Y6U7 377 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 MYO7BQ6PIF6 2116 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 FRYLO94915 3013 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SNRPGP15A8MWD9 76 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 CBR1P16152 277 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 DLSTP36957 453 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 RABIFP47224 123 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 CCR5P51681 352 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 FZD2Q14332 565 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 NR0B2Q15466 257 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 NKAIN2Q5VXU1 208 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 CLRN3Q8NCR9 226 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 PPP1R1CQ8WVI7 109 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 GAL3ST4Q96RP7 486 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF426Q9BUY5 554 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 CD207Q9UJ71 328 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SLCO1B1Q9Y6L6 691 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SPTY2D1-AS1A0A0U1RR47 76 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 XRCC3O43542 346 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SLC25A12O75746 678 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SEMA4FO95754 770 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-208ENST00000463007 AKR1C3P42330 323 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 BIKQ13323 160 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 MOGAT2Q3SYC2 334 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
HDAC4-208ENST00000463007 MRPL48Q96GC5 212 aaKnown RBP11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SPACA5Q96QH8 159 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 TREM1Q9NP99 234 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SERTAD3Q9UJW9 196 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
HDAC4-208ENST00000463007 KIR2DS5A0A0G2JLQ3 304 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 A0A0G2JNG1 304 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 KIR2DS3K7RE56 304 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 UPK3AO75631 287 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 NKX2-2O95096 273 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 CYB5AP00167 134 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 HPP00738 406 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 PI3P19957 117 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 CD34P28906 385 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 EPHA4P54764 986 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 CXADRP78310 365 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 ADAM8P78325 824 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 SRSF3P84103 164 aaKnown RBP11.22□□□□□ -0.61
HDAC4-208ENST00000463007 SERTAD2Q14140 314 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 KIR2DS5Q14953 304 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 WDR38Q5JTN6 314 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 OLFML2AQ68BL7 652 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 TMEM71Q6P5X7 295 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 DPY19L2P2Q6ZN68 376 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 GABRG1Q8N1C3 465 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 BPIFB2Q8N4F0 458 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 GPR148Q8TDV2 347 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF524Q96C55 264 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 SLC6A15Q9H2J7 730 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 FAM60AQ9NP50 221 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 PCDHB10Q9UN67 800 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 TRAV14DV4A0A0A6YYC5 116 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 A0A0B4J2A0 478 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 PRAMEF26H0Y7S4 382 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 MPZL1O95297 269 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 ILF3Q12906 894 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDAC4-208ENST00000463007 OR2W3Q7Z3T1 314 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 RTN4RL2Q86UN3 420 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 TMEM200AQ86VY9 491 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 PRSS35Q8N3Z0 413 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 C12orf57Q99622 126 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 SHPKQ9UHJ6 478 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 ICAM5Q9UMF0 924 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 B9D1Q9UPM9 204 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 TMEM200CA6NKL6 621 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 F8W036 122 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 LMX1BO60663 402 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 IL5P05113 134 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 GLAP06280 429 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 CSF1P09603 554 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 BLOC1S1P78537 153 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 IGLV3-21P80748 117 aaPredicted RBP11.22□□□□□ -0.61
HDAC4-208ENST00000463007 RPL18Q07020 188 aaKnown RBP11.22□□□□□ -0.61
HDAC4-208ENST00000463007 DHRS2Q13268 280 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 TDGQ13569 410 aa11.22□□□□□ -0.61
HDAC4-208ENST00000463007 CD226Q15762 336 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms