RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ARPC2O15144 300 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 NDUFB2O95178 105 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 SEMG1P04279 462 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 LCKP06239 509 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 APEHP13798 732 aaKnown RBP8.73□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF26P17031 533 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-204ENST00000462258 ITGA2P17301 1181 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 MSR1P21757 451 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 CCNOP22674 350 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 STOMP27105 288 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 LAP3P28838 519 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 OMPP47874 163 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 KLF3P57682 345 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-204ENST00000462258 ERVS71-1P61550 626 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 MXRA7P84157 204 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 SPIBQ01892 262 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 KRT72Q14CN4 511 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 SEC23BQ15437 767 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 SGCAQ16586 387 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 NKPD1Q17RQ9 610 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 CYB5R2Q6BCY4 276 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 C16orf89Q6UX73 402 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 FOXL2NBQ6ZUU3 175 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 FAM122BQ7Z309 247 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 PIGWQ7Z7B1 504 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF540Q8NDQ6 660 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 AKR7LQ8NHP1 331 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 UBASH3BQ8TF42 649 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 SNX33Q8WV41 574 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 RASD2Q96D21 266 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 RSRC1Q96IZ7 334 aaKnown RBP8.73□□□□□ -1.01
SF3A3-204ENST00000462258 DHRS1Q96LJ7 313 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 Q96M85 177 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 NSMCE2Q96MF7 247 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 GPX7Q96SL4 187 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-204ENST00000462258 BCL2L14Q9BZR8 327 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 MS4A5Q9H3V2 200 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 NDE1Q9NXR1 346 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 GRHPRQ9UBQ7 328 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 SIGLEC7Q9Y286 467 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 IGLV3-9A0A075B6K5 115 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 TEX13CA0A0J9YWL9 993 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 C5orf49A4QMS7 147 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 KIAA1324LA8MWY0 1029 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-204ENST00000462258 NCR1O76036 304 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CLPTM1O96005 669 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CST2P09228 141 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 NAT2P11245 290 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF23P17027 643 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 GIFP27352 417 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 SDHAP31040 664 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 MSX2P35548 267 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-204ENST00000462258 WNT5AP41221 380 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 GUCA1AP43080 201 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-204ENST00000462258 RAD52P43351 418 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 GDI2P50395 445 aaKnown RBP8.72□□□□□ -1.01
SF3A3-204ENST00000462258 UCP2P55851 309 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 SELENOVP59797 346 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 PCBD1P61457 104 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 PSG4Q00888 419 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 ENDOGQ14249 297 aaKnown RBP8.72□□□□□ -1.01
SF3A3-204ENST00000462258 ALKBH6Q3KRA9 238 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CHRFAM7AQ494W8 412 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 FAM27BQ5VT28 67 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 THSD4Q6ZMP0 1018 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 RFPL4BQ6ZWI9 263 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 HIPK1Q86Z02 1210 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 DEFB107AQ8IZN7 70 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF786Q8N393 782 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
SF3A3-204ENST00000462258 OR1J1Q8NGS3 322 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 OR52J3Q8NH60 311 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 SYNPRQ8TBG9 265 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 FANK1Q8TC84 345 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 MCUR1Q96AQ8 359 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 PYURFQ96I23 114 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 POM121L2Q96KW2 1035 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CDRT15Q96T59 188 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF416Q9BWM5 594 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 OR2H1Q9GZK4 316 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 WNT5BQ9H1J7 359 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 POLE4Q9NR33 117 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 TAAR3PQ9P1P4 343 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CD300AQ9UGN4 299 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 CDC42EP3Q9UKI2 254 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 AURKCQ9UQB9 309 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 TANC2Q9HCD6 1990 aa8.72□□□□□ -1.01
SF3A3-204ENST00000462258 LOC100509620A0A075B734 347 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 PRSS37A4D1T9 235 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 LRP5LA4QPB2 252 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 UNC119BA6NIH7 251 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 LYNX1G3V0Z9 82 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 AHCYL1O43865 530 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 GADD45GO95257 159 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 HPXP02790 462 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 FABP3P05413 133 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 TACSTD2P09758 323 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 LYNX1P0DP58 116 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 ZNF250P15622 560 aa8.71□□□□□ -1.02
SF3A3-204ENST00000462258 CTLA4P16410 223 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms