RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 OTUB1Q96FW1 271 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 HYLS1Q96M11 299 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 CMTM3Q96MX0 182 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 MUS81Q96NY9 551 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 COL21A1Q96P44 957 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 ZNF300Q96RE9 604 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 JMJD8Q96S16 334 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 ADOQ96SZ5 270 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 BEX2Q9BXY8 128 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 SLIRPQ9GZT3 109 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 NXF2Q9GZY0 626 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 ALX4Q9H161 411 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 OR51I1Q9H343 314 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 METTL7AQ9H8H3 244 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 TPT1P8Q9HAU6 139 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 IL1RL2Q9HB29 575 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 DUSP22Q9NRW4 184 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC6A13Q9NSD5 602 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 C19orf12Q9NSK7 152 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 MCUBQ9NWR8 336 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 ZNF224Q9NZL3 707 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 CNIH4Q9P003 139 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 ASH2LQ9UBL3 628 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 PRSS50Q9UI38 385 aa5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 MAGED1Q9Y5V3 778 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 YLPM1P49750 1951 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-204ENST00000462198 FREM1Q5H8C1 2179 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 A0A1B0GW55 424 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 GXYLT2A0PJZ3 443 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PRAMEF25A6NGN4 478 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 OR6C70A6NIJ9 312 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ZNF729A6NN14 1252 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 G3V3Y1 287 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 J3KRW8 73 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ACOT7O00154 380 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 NDUFS8O00217 210 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CLIC1O00299 241 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC16A6O15403 523 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 TSPAN2O60636 221 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 WDR1O75083 606 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CLIC3O95833 236 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 C1QCP02747 245 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 GLAP06280 429 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 FBP1P09467 338 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DUX4L2P0CJ85 424 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DUX4L3P0CJ86 424 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DUX4L4P0CJ87 422 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DUX4L5P0CJ88 424 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DUX4L6P0CJ89 424 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DUX4L7P0CJ90 424 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 OR12D1P0DN82 309 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CCL3P10147 92 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 RRASP10301 218 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 THRBP10828 461 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CLUP10909 449 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 HOXB6P17509 224 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CNR1P21554 472 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PPIBP23284 216 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 HLA-DMAP28067 261 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ELK4P28324 431 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PTPN6P29350 595 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 RYKP34925 604 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 NUP62P37198 522 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ETV6P41212 452 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 MAP3K8P41279 467 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 MAN2A2P49641 1150 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 GSK3BP49841 420 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PNLIPRP2P54317 469 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CXCR4P61073 352 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ISL1P61371 349 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PPIAP62937 165 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DEFA6Q01524 100 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 EGR3Q06889 387 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 GRK1Q15835 563 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 BAK1Q16611 211 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PAGE3Q5JUK9 113 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 DCST2Q5T1A1 773 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 LRIF1Q5T3J3 769 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PRAMEF20Q5VT98 475 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 TTC23Q5W5X9 447 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 TNFAIP8L2Q6P589 184 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 TBPL2Q6SJ96 375 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 C16orf54Q6UWD8 224 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 C12orf54Q6X4T0 127 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CFAP77Q6ZQR2 320 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 PGAP1Q75T13 922 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 GALNT10Q86SR1 603 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ZDHHC13Q8IUH4 622 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 OFCC1Q8IZS5 231 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 EIF4E3Q8N5X7 224 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 OR1M1Q8NGA1 313 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 SPPL2AQ8TCT8 520 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 ZFP90Q8TF47 636 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 XAGE5Q8WWM1 108 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 CYGBQ8WWM9 190 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC7A6Q92536 515 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 HOXB13Q92826 284 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 RAB8BQ92930 207 aa5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 POP5Q969H6 163 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC35A4Q96G79 324 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms