RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 DLL4Q9NR61 685 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 LIN7CQ9NUP9 197 aaKnown RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 PADI1Q9ULC6 663 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 MYO5BQ9ULV0 1848 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 NCBP2LA6PVI3 153 aaKnown RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 EDN1P05305 212 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 BMP1P13497 986 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 EN2P19622 333 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 TGM1P22735 817 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 APEX1P27695 318 aaKnown RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR10A3P58181 314 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 FAM26DQ5JW98 314 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 PXDC1Q5TGL8 231 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 TIGD3Q6B0B8 471 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 GDF7Q7Z4P5 450 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 CDH26Q8IXH8 852 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR2M7Q8NG81 312 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR10P1Q8NGE3 313 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 TVP23CQ96ET8 276 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 C20orf24Q9BUV8 137 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 JAM3Q9BX67 310 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 SLCO1B1Q9Y6L6 691 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 NEURL4Q96JN8 1562 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 LTBP3Q9NS15 1303 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 SLC5A10A0PJK1 596 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM189-UBE2V1I3L0A0 370 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 LGI1O95970 557 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 ADRB1P08588 477 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 HLA-FP30511 346 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.27□□□□□ -1.092e-8■■■■■ 27.8
BRCA1-205ENST00000461221 H1FNTQ75WM6 255 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR13F1Q8NGS4 319 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR51H1Q8NH63 302 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR6C1Q96RD1 312 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 EFSO43281 561 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 ICMTO60725 284 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 SIX6O95475 246 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 BMI1P35226 326 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 RBP2P50120 134 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 CLDN10P78369 228 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 LHFPL2Q6ZUX7 228 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 NEURL3Q96EH8 262 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 HSFX1Q9UBD0 423 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 PLRG1O43660 514 aaKnown RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 FURINP09958 794 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR5G3P0C626 314 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 AKR1C3P42330 323 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 SNRPGP62308 76 aaKnown RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 OR5I1Q13606 314 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 CLLU1OSQ5K130 101 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 C1orf140Q5VVS0 124 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 RPL3LQ92901 407 aaKnown RBP8.27□□□□□ -1.09
BRCA1-205ENST00000461221 S1PR3Q99500 378 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 IKZF5Q9H5V7 419 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 FBXO34Q9NWN3 711 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 CSAG2Q9Y5P2 127 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 ROBO1Q9Y6N7 1651 aa8.27□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM131LA2VDJ0 1609 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 OR2M5A3KFT3 312 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 H3BQ06 376 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 SCGB1C2P0DMR2 95 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 APOBEC1P41238 236 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 KIAA1024LP59773 190 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 PLPP7Q8NBV4 271 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TAAR6Q96RI8 345 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 STACQ99469 402 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 PLEKHA2Q9HB19 425 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 CBY3A6NI87 242 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 NME2P1O60361 137 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF865P0CJ78 1059 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 COX5AP20674 150 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 MRPL19P49406 292 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 RPL27P61353 136 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 DHODHQ02127 395 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 C1orf220Q5T0J3 134 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 OR51S1Q8NGJ8 323 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 EGLN2Q96KS0 407 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 SRRQ9GZT4 340 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 EMCNQ9ULC0 261 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TIMM9Q9Y5J7 89 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 PMS2P1A4D2B8 440 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 H3BNC9 293 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TERTO14746 1132 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 CA3P07451 260 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 CYB561P49447 251 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TEKQ02763 1124 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TBPL2Q6SJ96 375 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 C17orf107Q6ZR85 190 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 ACOT7LQ6ZUV0 252 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 PHOSPHO2Q8TCD6 241 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 MS4A8Q9BY19 250 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM38AQ9H6F2 299 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 ZMAT5Q9UDW3 170 aaKnown RBP8.26□□□□□ -1.09
BRCA1-205ENST00000461221 SNX11Q9Y5W9 270 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 E5RGE8 158 aa8.26□□□□□ -1.09
BRCA1-205ENST00000461221 HS3ST1O14792 307 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms