RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MICAQ29983 383 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CDNFQ49AH0 187 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RFTN2Q52LD8 501 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 GPAT3Q53EU6 434 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 KRTCAP3Q53RY4 240 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ALG10Q5BKT4 473 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ALG10BQ5I7T1 473 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PABPC1L2AQ5JQF8 200 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ENTPD8Q5MY95 495 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ARHGAP11AQ6P4F7 1023 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 TRIM40Q6P9F5 258 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 TTC33Q6PID6 262 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CFAP77Q6ZQR2 320 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ABHD13Q7L211 337 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SSX9Q7RTT3 188 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SERPINA11Q86U17 422 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PHC2Q8IXK0 858 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 C8orf59Q8N0T1 100 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 METTL4Q8N3J2 472 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 KRTCAP2Q8N6L1 136 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 GJC3Q8NFK1 279 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 OR11G2Q8NGC1 345 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 OR13C3Q8NGS6 347 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 OR2Y1Q8NGV0 311 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 NDNFQ8TB73 568 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 C16orf78Q8WTQ4 265 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 DEDD2Q8WXF8 326 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC7A6Q92536 515 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RBPMSQ93062 196 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 UBE2E3Q969T4 207 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 KIAA1143Q96AT1 154 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ANKRD9Q96BM1 317 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 TM4SF18Q96CE8 201 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RNF183Q96D59 192 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CCDC126Q96EE4 140 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 LURAP1Q96LR2 239 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 HYLS1Q96M11 299 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RILPQ96NA2 401 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 LRFN5Q96NI6 719 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 TSSK3Q96PN8 268 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 WDR77Q9BQA1 342 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 EBF4Q9BQW3 602 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 C2orf88Q9BSF0 95 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 MED18Q9BUE0 208 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 C1QTNF5Q9BXJ0 243 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 DNTTIP1Q9H147 329 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 HRH4Q9H3N8 390 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SAV1Q9H4B6 383 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 COPS7BQ9H9Q2 264 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 LRTM1Q9HBL6 345 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF160Q9HCG1 818 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PNO1Q9NRX1 252 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 P4HTMQ9NXG6 502 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 BABAM2Q9NXR7 383 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 VPS29Q9UBQ0 182 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF282Q9UDV7 671 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 FBXL4Q9UKA2 621 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 TRAPPC4Q9Y296 219 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 NUBP2Q9Y5Y2 271 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CACNA1DQ01668 2161 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 MED12Q93074 2177 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ABCA2Q9BZC7 2435 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 EML6Q6ZMW3 1958 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SPENQ96T58 3664 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ADGRG4Q8IZF6 3080 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 IGKV3D-11A0A0A0MRZ8 115 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 A0A0G2JND7 137 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 GNG14A0A1W2PPG7 69 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 METTL15A6NJ78 407 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 A8MXE2 369 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 H0YIG0 161 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 K7ENP7 123 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 FOXE1O00358 373 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CLDN4O14493 209 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RRP8O43159 456 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 FCER2P06734 321 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 FGF4P08620 206 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 STSP08842 583 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 GNAO1P09471 354 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ANXA4P09525 319 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RAB40ALP0C0E4 278 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CT62P0C5K7 136 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 LINC00614P0C842 121 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 G6PDP11413 515 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 COX6A1P12074 109 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 BCKDHAP12694 445 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RNH1P13489 461 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ETFAP13804 333 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 HOXB6P17509 224 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 SDC1P18827 310 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 C4BPBP20851 252 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CD82P27701 267 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CRABP1P29762 137 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 TIA1P31483 386 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NUP62P37198 522 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CAPGP40121 348 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RPL14P50914 215 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ALDH3A2P51648 485 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms