RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 KLK7P49862 253 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 IST1P53990 364 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CLDN18P56856 261 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 YWHAEP62258 255 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 MRPS22P82650 360 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 CDH17Q12864 832 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RCAN2Q14206 197 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 GNMTQ14749 295 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 UAP1Q16222 522 aaPredicted RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 QRICH1Q2TAL8 776 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SLC22A6Q4U2R8 563 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 GPRC6AQ5T6X5 926 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ZNF658Q5TYW1 1059 aaPredicted RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 ZNF836Q6ZNA1 936 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 COPS6Q7L5N1 327 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SPATA24Q86W54 205 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CMTM8Q8IZV2 173 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SVOPLQ8N434 492 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ACOT4Q8N9L9 421 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CSNK1G2-AS1Q8NCQ2 148 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 OR51L1Q8NGJ5 315 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SUN5Q8TC36 379 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CCDC126Q96EE4 140 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ZBED3Q96IU2 234 aaPredicted RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 ABCC12Q96J65 1359 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ALS2CR12Q96Q35 445 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 XPO6Q96QU8 1125 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 PSMB7Q99436 277 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 TMEM175Q9BSA9 504 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 WNK3Q9BYP7 1800 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 GNB4Q9HAV0 340 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 TMEM165Q9HC07 324 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 LSM7Q9UK45 103 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 PLLPQ9Y342 182 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RPL36Q9Y3U8 105 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 PAPPAQ13219 1627 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 NHSL1Q5SYE7 1610 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 DUOX1Q9NRD9 1551 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 BCL9O00512 1426 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RIC1Q4ADV7 1423 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 TMEM2Q9UHN6 1383 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 H7C423 109 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 M0R3G1 203 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RAD51CO43502 376 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 UGT1A9O60656 530 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 FCN3O75636 299 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 DEXIO95424 95 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ALDOBP05062 364 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SLC35E2P0CK97 266 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 NPR2P20594 1047 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 VDAC1P21796 283 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ADORA1P30542 326 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CALCRP30988 508 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RORAP35398 523 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 DDOSTP39656 456 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SLC1A1P43005 524 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CX3CR1P49238 355 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 HNRNPA3P51991 378 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 PSMD4P55036 377 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 RPL32P62910 135 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 PAX2Q02962 417 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 GPR176Q14439 515 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 SPA17Q15506 151 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 PPM1LQ5SGD2 360 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 C6orf183Q5T699 404 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ZC2HC1BQ5TFG8 222 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 GPR157Q5UAW9 335 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ERICH5Q6P6B1 374 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 ULK3Q6PHR2 472 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 MRPL21Q7Z2W9 205 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 HIPK1Q86Z02 1210 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 NAXDQ8IW45 347 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 GPR65Q8IYL9 337 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 AGAP11Q8TF27 550 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 PIH1D2Q8WWB5 315 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 IFT81Q8WYA0 676 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 NAT6Q93015 286 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 LINC00479Q96M42 142 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 CCDC42Q96M95 316 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 FAM210AQ96ND0 272 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RANBP9Q96S59 729 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 RBM4BQ9BQ04 359 aaKnown RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 TRIM51Q9BSJ1 452 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 TM6SF2Q9BZW4 377 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 YIPF3Q9GZM5 350 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 NMUR2Q9GZQ4 415 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 FGF20Q9NP95 211 aaPredicted RBP2.3□□□□□ -2.04
HPS3-203ENST00000460822 RMND1Q9NWS8 449 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 OR1A1Q9P1Q5 309 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 MOB4Q9Y3A3 225 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 KPTNQ9Y664 436 aa2.3□□□□□ -2.04
HPS3-203ENST00000460822 PRSS37A4D1T9 235 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 DCTN6O00399 190 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CDX4O14627 284 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 PPP1R2P9O14990 202 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 PHF1O43189 567 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 KLRC4O43908 158 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CIAO1O76071 339 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 LALBAP00709 142 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms