RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GPN3Q9UHW5 284 aaPredicted RBP13.96□□□□□ -0.18
LMNB1-203ENST00000460265 IGHV1OR21-1A0A087WYE8 117 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SMAD9O15198 467 aaKnown RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 VEGFCP49767 419 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 ADAM8P78325 824 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 TRAM1Q15629 374 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 RPL22L1Q6P5R6 122 aaKnown RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SPAG16Q8N0X2 631 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 HLA-CQ95604 372 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SGK3Q96BR1 496 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 PRMT8Q9NR22 394 aaPredicted RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 CEP250Q9BV73 2442 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 RD3LP0DJH9 198 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SPP1P10451 314 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SRMP19623 302 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 RPS4Y1P22090 263 aaKnown RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 GNALP38405 381 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 MAP3K8P41279 467 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 CDK5R1Q15078 307 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 OR7A5Q15622 319 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 MEP1BQ16820 701 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 FAM74A1Q5RGS3 127 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 MAMDC2Q7Z304 686 aaPredicted RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 NR2C2APQ86WQ0 139 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 CBLN2Q8IUK8 224 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 TAS2R10Q9NYW0 307 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 MBD2Q9UBB5 411 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 DCTN6O00399 190 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 IFNA4P05014 189 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SLC37A1P57057 533 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 PLAURQ03405 335 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF141Q15928 474 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 Q3ZCU0 254 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 TMEM69Q5SWH9 247 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 CARD17Q5XLA6 110 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 ARIH2OSQ8N7S6 290 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 PXT1Q8NFP0 134 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 BPIFCQ8NFQ6 507 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 OR5M1Q8NGP8 315 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 OR8S1Q8NH09 359 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 KISS1RQ969F8 398 aaPredicted RBP13.95□□□□□ -0.18
LMNB1-203ENST00000460265 TMEM106AQ96A25 262 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 GINS4Q9BRT9 223 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 METTL7AQ9H8H3 244 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 MIOXQ9UGB7 285 aa13.95□□□□□ -0.18
LMNB1-203ENST00000460265 H0YIG0 161 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 GPR31O00270 319 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 PLPP2O43688 288 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SUSD5O60279 629 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 GLCEO94923 617 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 CSN2P05814 226 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ACAA1P09110 424 aaPredicted RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 PPP3CBP16298 524 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF117Q03924 483 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 FUT7Q11130 342 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ELAVL1Q15717 326 aaKnown RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 NUP54Q7Z3B4 507 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 NPEPL1Q8NDH3 523 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 CCDC74AQ96AQ1 378 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SMIM19Q96E16 107 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF251Q9BRH9 671 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 C20orf85Q9H1P6 137 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ELOVL3Q9HB03 270 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 KCNK7Q9Y2U2 307 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 PLSCR5A0PG75 271 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ZFPL1O95159 310 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 RBMS1P29558 406 aaKnown RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 CAPZA1P52907 286 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF74Q16587 644 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 JAGN1Q8N5M9 183 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 TMEM185AQ8NFB2 350 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 EMC6Q9BV81 110 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 VN1R1Q9GZP7 353 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 MMP25Q9NPA2 562 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF281Q9Y2X9 895 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SVILO95425 2214 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 A0A087WV48 116 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 LILRA5A6NI73 299 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 GABRA1P14867 456 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SFTPDP35247 375 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 AKR1C2P52895 323 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SEC61A1P61619 476 aaKnown RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SNRPEP62304 92 aaKnown RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 PITPNAQ00169 270 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 AKR1C1Q04828 323 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF615Q8N8J6 731 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 OR10H5Q8NGA6 315 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
LMNB1-203ENST00000460265 RPH3AQ9Y2J0 694 aaPredicted RBP13.94□□□□□ -0.18
LMNB1-203ENST00000460265 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 DCDC2BA2VCK2 349 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 NPIPA5E9PKD4 350 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 G3V3Q6 166 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms