RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CISD1Q9NZ45 108 aaKnown RBP9.31□□□□□ -0.92
UBR4-208ENST00000459947 SPTAN1Q13813 2472 aaKnown RBP9.31□□□□□ -0.92
UBR4-208ENST00000459947 FREM1Q5H8C1 2179 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 SLC2A10O95528 541 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 PRF1P14222 555 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 FUT4P22083 530 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 RAD52P43351 418 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 RAB35Q15286 201 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 FAM209AQ5JX71 171 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 SHEQ5VZ18 495 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 PIAS4Q8N2W9 510 aaPredicted RBP9.31□□□□□ -0.92
UBR4-208ENST00000459947 GJC3Q8NFK1 279 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 OR4K13Q8NH42 304 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 NABP1Q96AH0 204 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 COQ7Q99807 217 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 S100A14Q9HCY8 104 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 CBLN4Q9NTU7 201 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 SHISA9B4DS77 424 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 HLA-HP01893 362 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 HIST1H1CP16403 213 aaKnown RBP9.31□□□□□ -0.92
UBR4-208ENST00000459947 ZNF14P17017 642 aaPredicted RBP9.31□□□□□ -0.92
UBR4-208ENST00000459947 ZNF26P17031 533 aaPredicted RBP9.31□□□□□ -0.92
UBR4-208ENST00000459947 FMO3P31513 532 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 FABP6P51161 128 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 DAG1Q14118 895 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 NTN4Q9HB63 628 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 REV1Q9UBZ9 1251 aa9.31□□□□□ -0.92
UBR4-208ENST00000459947 IGHV2OR16-5A0A0B4J2B6 119 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 B9A039 149 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 PRODHO43272 600 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 APOC1P02654 83 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 GIPRP48546 466 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 NPRL3Q12980 569 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 GINS1Q14691 196 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 EFNB3Q15768 340 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 SHFQ7M4L6 423 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 SLC30A7Q8NEW0 376 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 PROKR2Q8NFJ6 384 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 KBTBD8Q8NFY9 601 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 SMAP2Q8WU79 429 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 RDH12Q96NR8 316 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 MYCBPQ99417 103 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 MYOZ1Q9NP98 299 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 CGGBP1Q9UFW8 167 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 IGLV1-36A0A0B4J1U3 117 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 MMP7P09237 267 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 IGFBP5P24593 272 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 CDKN2AP42771 156 aaKnown RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 SNRPD2P62316 118 aaKnown RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 FMODQ06828 376 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 TMED1Q13445 227 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 CLEC12AQ5QGZ9 265 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 PRSS57Q6UWY2 283 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 SLC37A3Q8NCC5 494 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 LRTOMTQ8WZ04 291 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 NIPSNAP1Q9BPW8 284 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 OR2H1Q9GZK4 316 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 CMAHPQ9Y471 501 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 PRR23D1E9PI22 279 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 CSF3P09919 207 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 PRR23D2P0DMB1 279 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 CTLA4P16410 223 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 GLRXP35754 106 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 CDK5Q00535 292 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 DEFB113Q30KQ7 82 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 TEX30Q5JUR7 227 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 KDM4DQ6B0I6 523 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 PTCHD4Q6ZW05 846 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 HS3ST6Q96QI5 342 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 MNTQ99583 582 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 CDADC1Q9BWV3 514 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 NUAK2Q9H093 628 aa9.3□□□□□ -0.92
UBR4-208ENST00000459947 COA3Q9Y2R0 106 aaPredicted RBP9.3□□□□□ -0.92
UBR4-208ENST00000459947 OR6C6A6NF89 314 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 MT-ND5P03915 603 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 ZNF32P17041 273 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 NR4A1P22736 598 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 PQLC1Q8N2U9 271 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 ZNF454Q8N9F8 522 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 NMNAT3Q96T66 252 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 TRAF4Q9BUZ4 470 aaPredicted RBP9.29□□□□□ -0.92
UBR4-208ENST00000459947 GSX2Q9BZM3 304 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 RPRD1BQ9NQG5 326 aaKnown RBP9.29□□□□□ -0.92
UBR4-208ENST00000459947 SGCEO43556 437 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 ICMTO60725 284 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 CD53P19397 219 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 POU1F1P28069 291 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 NUDT6P53370 316 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 RAB39AQ14964 217 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 SDR9C7Q8NEX9 313 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 OR5L1Q8NGL2 311 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 OR8D4Q8NGM9 314 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 GABARAPL3Q9BY60 117 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 NMNAT2Q9BZQ4 307 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 PKDREJQ9NTG1 2253 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 A0A1W2PR80 420 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 SEC14L2O76054 403 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 HLA-DQA2P01906 255 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms