RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZNF24P17028 368 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 CCKBRP32239 447 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 ST3GAL2Q16842 350 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 PMS2CLQ68D20 193 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 ANKRD16Q6P6B7 361 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 DEGS2Q6QHC5 323 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 BPHLQ86WA6 291 aaPredicted RBP13.51□□□□□ -0.25
LDLR-202ENST00000455727 PPP1R3BQ86XI6 285 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 KDM8Q8N371 416 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 OR11G2Q8NGC1 345 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 GCDHQ92947 438 aaPredicted RBP13.51□□□□□ -0.25
LDLR-202ENST00000455727 PHF21AQ96BD5 680 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 C19orf25Q9UFG5 118 aaPredicted RBP13.51□□□□□ -0.25
LDLR-202ENST00000455727 PILRBQ9UKJ0 227 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 SLC22A13Q9Y226 551 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 LIPT2A6NK58 231 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 SLC17A2O00624 439 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 ZNF780AO75290 641 aaPredicted RBP13.51□□□□□ -0.25
LDLR-202ENST00000455727 TGM6O95932 706 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 HRGP04196 525 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 SULT1A3P0DMM9 295 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 SULT1A4P0DMN0 295 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 ZNF823P16415 610 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 HSF1Q00613 529 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 TLE3Q04726 772 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 FOXF1Q12946 379 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 FAM166AQ6J272 317 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 LYPD8Q6UX82 237 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 CREB3L2Q70SY1 520 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 ASB5Q8WWX0 329 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 CRB3Q9BUF7 120 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 FBXL3Q9UKT7 428 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 DHDHQ9UQ10 334 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 VDAC3Q9Y277 283 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 R4GMQ9 66 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 A0A1B0GVI7 797 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 H0YC42 278 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 SMLR1H3BR10 107 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ISG15P05161 165 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 CD2P06729 351 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 FSTP19883 344 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 HLA-BQ31612 363 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 BTBD16Q32M84 506 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 OTPQ5XKR4 325 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 SFRP4Q6FHJ7 346 aaPredicted RBP13.5□□□□□ -0.25
LDLR-202ENST00000455727 OR7E24Q6IFN5 339 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 TSSK4Q6SA08 328 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.5□□□□□ -0.25
LDLR-202ENST00000455727 GLB1L2Q8IW92 636 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 KLRF1Q9NZS2 232 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 MRPL15Q9P015 296 aaKnown RBP13.5□□□□□ -0.25
LDLR-202ENST00000455727 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 KIF26BQ2KJY2 2108 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 MEIKINA0A087WXM9 373 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 A0A1W2PNV4 684 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 YKT6O15498 198 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 MPZL1O95297 269 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 SYPP08247 313 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ITGA5P08648 1049 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 PTGDSP41222 190 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ZNF41P51814 821 aaPredicted RBP13.5□□□□□ -0.25
LDLR-202ENST00000455727 MFGE8Q08431 387 aaPredicted RBP13.5□□□□□ -0.25
LDLR-202ENST00000455727 TOMM20Q15388 145 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 TMEM255AQ5JRV8 349 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ASPHD2Q6ICH7 369 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 NDUFAF7Q7L592 441 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ST7LQ8TDW4 575 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 UTP23Q9BRU9 249 aaKnown RBP13.5□□□□□ -0.25
LDLR-202ENST00000455727 DIABLOQ9NR28 239 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 PISDQ9UG56 409 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 ZNF222Q9UK12 451 aa13.5□□□□□ -0.25
LDLR-202ENST00000455727 TRIOBPQ9H2D6 2365 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 A0A1W2PPC1 479 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 CTAG2O75638 210 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 FBXO45P0C2W1 286 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 TMIGD3P0DMS9 266 aaPredicted RBP13.49□□□□□ -0.25
LDLR-202ENST00000455727 IGFBP3P17936 291 aaPredicted RBP13.49□□□□□ -0.25
LDLR-202ENST00000455727 RAB11BQ15907 218 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 CLPPQ16740 277 aaPredicted RBP13.49□□□□□ -0.25
LDLR-202ENST00000455727 PLPPR5Q32ZL2 321 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 TMEM225Q6GV28 225 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 MRPL14Q6P1L8 145 aaKnown RBP13.49□□□□□ -0.25
LDLR-202ENST00000455727 C9orf62Q8N4C0 152 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 SLC22A8Q8TCC7 542 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 PMEPA1Q969W9 287 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 MED30Q96HR3 178 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 ZFP64Q9NPA5 681 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 TAS2R8Q9NYW2 309 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 KLHL13Q9P2N7 655 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 CKLFQ9UBR5 152 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 CDV3Q9UKY7 258 aaKnown RBP13.49□□□□□ -0.25
LDLR-202ENST00000455727 RPH3AQ9Y2J0 694 aaPredicted RBP13.49□□□□□ -0.25
LDLR-202ENST00000455727 HSPB11Q9Y547 144 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 WIF1Q9Y5W5 379 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 VCANP13611 3396 aa13.49□□□□□ -0.25
LDLR-202ENST00000455727 LOC100289279A0A1B0GTE1 492 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 ANKRD34BA5PLL1 514 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms