RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TGDSO95455 350 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TSPAN15O95858 294 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MT-ATP6P00846 226 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGHV3-13P01766 116 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IGHMP01871 453 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MT-ND5P03915 603 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RNASE1P07998 156 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ASAH2BP0C7U1 165 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ANPEPP15144 967 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CD247P20963 164 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PAX7P23759 505 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC6A2P23975 617 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LAP3P28838 519 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GCH1P30793 250 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ATP4BP51164 291 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MMP16P51512 607 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF84P51523 738 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PCBP3P57721 371 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SELENOVP59797 346 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 STX1BP61266 288 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PPP1CBP62140 327 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TNFAIP6P98066 277 aaPredicted RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RELBQ01201 579 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PRB3Q04118 309 aaPredicted RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PLP2Q04941 152 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FOXL1Q12952 345 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SGCAQ16586 387 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 LRIF1Q5T3J3 769 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 C1orf94Q6P1W5 598 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 Q6ZR03 302 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NET1Q7Z628 596 aaPredicted RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SNX32Q86XE0 403 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NKAIN4Q8IVV8 208 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR5AS1Q8N127 324 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MREGQ8N565 214 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HIPK4Q8NE63 616 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 C19orf18Q8NEA5 215 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR2Z1Q8NG97 314 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF420Q8TAQ5 688 aaPredicted RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ITLN1Q8WWA0 313 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC35B4Q969S0 331 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MARS2Q96GW9 593 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 POM121L2Q96KW2 1035 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SIGLEC11Q96RL6 698 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM109Q9BVC6 243 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BCL2L14Q9BZR8 327 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR2H1Q9GZK4 316 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SSU72Q9NP77 194 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CCNB1IP1Q9NPC3 277 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NANSQ9NR45 359 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TMEM106BQ9NUM4 274 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 THAP1Q9NVV9 213 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 THUMPD1Q9NXG2 353 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 EGFL7Q9UHF1 273 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FBXL3Q9UKT7 428 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NUP50Q9UKX7 468 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 AUP1Q9Y679 476 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 USH1CQ9Y6N9 552 aa5.04□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DOCK11Q5JSL3 2073 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC22A23A1A5C7 686 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TRAPPC13A5PLN9 417 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PRORSD1PA6NEY8 169 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 IMPA2O14732 288 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 POLR3GO15318 223 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FOXH1O75593 365 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CYB5R3P00387 301 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PRB2P02812 416 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SCG5P05408 212 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SFTPBP07988 381 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 RPS2P15880 293 aaKnown RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ACADSP16219 412 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF12P17014 697 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FPR2P25090 351 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CD80P33681 288 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GDI2P50395 445 aaKnown RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC18A1P54219 525 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MAGOHP61326 146 aaKnown RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BTG1P62324 171 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PSG4Q00888 419 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TEKQ02763 1124 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ENDOGQ14249 297 aaKnown RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 HLXQ14774 488 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 AGKQ53H12 422 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TNFAIP8L3Q5GJ75 292 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 FAM209AQ5JX71 171 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SWT1Q5T5J6 900 aaKnown RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF613Q6PF04 617 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TTC33Q6PID6 262 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BRICD5Q6PL45 260 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BLOC1S3Q6QNY0 202 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DHDDSQ86SQ9 333 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 KIR3DL3Q8N743 410 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 BHLHE23Q8NDY6 225 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR13C2Q8NGS9 318 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR6S1Q8NH40 331 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SLC25A28Q96A46 364 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NMD3Q96D46 503 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms