RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NDRG3Q9UGV2 375 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 ASXL3Q9C0F0 2248 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 KNG1P01042 644 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 PMP2P02689 132 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 RIPPLY1Q0D2K3 151 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 FAM53BQ14153 422 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 PAPD4Q6PIY7 484 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 COX15Q7KZN9 410 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 OR4K17Q8NGC6 315 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 FBXO17Q96EF6 278 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 MMABQ96EY8 250 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 ZNF285Q96NJ3 590 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 ADOQ96SZ5 270 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 PURGQ9UJV8 347 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 BCL2L11O43521 198 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 MED6O75586 246 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 STK17BO94768 372 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 OR2F2O95006 317 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 AKR7A3O95154 331 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 CEACAM5P06731 702 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 CISD3P0C7P0 127 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 RPA2P15927 270 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 NFYBP25208 207 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 OR2F1Q13607 317 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 EBPQ15125 230 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 TMEM200AQ86VY9 491 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 FAM83CQ9BQN1 747 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 SLC25A21Q9BQT8 299 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 TIMM29Q9BSF4 260 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 G6PC3Q9BUM1 346 aa12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 PRMT8Q9NR22 394 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-210ENST00000453744 TMEM218A2RU14 115 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 DCTN6O00399 190 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 FKTNO75072 461 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 EML2O95834 649 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 ERCC1P07992 297 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 PEBP1P30086 187 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 CD80P33681 288 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 EXOSC6Q5RKV6 272 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 PEG10Q86TG7 708 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 RGP1Q92546 391 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 ZNF764Q96H86 408 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 COX14Q96I36 57 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 MOGAT1Q96PD6 335 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 GFI1Q99684 422 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 JAM3Q9BX67 310 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 RASL12Q9NYN1 266 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 EMC9Q9Y3B6 208 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 SERINC4A6NH21 518 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 HRKO00198 91 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 ITGA5P08648 1049 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 SPP1P10451 314 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 SERPINF1P36955 418 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 ANKRD16Q6P6B7 361 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 GVQW1Q8N7I0 195 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 PLEKHA1Q9HB21 404 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 RPH3AQ9Y2J0 694 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 ADAM11O75078 769 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 RAB6AP20340 208 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 WDR38Q5JTN6 314 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 LILRA6Q6PI73 481 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 SLC29A4Q7RTT9 530 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 MRPL43Q8N983 215 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 NAXEQ8NCW5 288 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 TCEAL3Q969E4 200 aa12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-210ENST00000453744 PRSS38A1L453 326 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 MPIG6BO95866 241 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 WNT11O96014 354 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 PPIAP62937 165 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 PPP1R1AQ13522 171 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 SLC35D3Q5M8T2 416 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 OR1M1Q8NGA1 313 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 PRRT1Q99946 306 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 TBL1XR1Q9BZK7 514 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 DNAJB12Q9NXW2 375 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 GP1BAP07359 652 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 TACR3P29371 465 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 ARL4DP49703 201 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 MEOX2P50222 304 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 NPY4RP50391 375 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 RPL18Q07020 188 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 PLEKHN1Q494U1 663 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 MDGA2Q7Z553 956 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 RNF141Q8WVD5 230 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 CRYBA1P05813 215 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 TSFMP43897 325 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 ATPAF1Q5TC12 328 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 ZNF776Q68DI1 518 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 NUBPLQ8TB37 319 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
UBE2D3-210ENST00000453744 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms