RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 FRAT1Q92837 279 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 TSG101Q99816 390 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 C19orf24Q9BVV8 132 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 Q9H3A6 140 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 PATZ1Q9HBE1 687 aaKnown RBP3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 DMAP1Q9NPF5 467 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 CD300AQ9UGN4 299 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 RLFQ13129 1914 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 RALGAPA1Q6GYQ0 2036 aa3.73□□□□□ -1.81
HMGB1P26-201ENST00000452520 GOLGA8QA0A0J9YX86 632 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 PSMB11A5LHX3 300 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF726A6NNF4 738 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 IQCF5A8MTL0 148 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 H7C0C1 242 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 XRCC2O43543 280 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 ICOSLGO75144 302 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 LYPLA1O75608 230 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 YEATS4O95619 227 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 LSM8O95777 96 aaKnown RBP3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 OXTP01178 125 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 GLP1RP43220 463 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 BTDP43251 543 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 EGFEM1PQ0D2K5 195 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 TRDNQ13061 729 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 VAMP3Q15836 100 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 USF2Q15853 346 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF726P1Q15940 193 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 TPRG1LQ5T0D9 272 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 TMIGD1Q6UXZ0 262 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF620Q6ZNG0 422 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 FAM220AQ7Z4H9 259 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 GPD1LQ8N335 351 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 OR10H4Q8NGA5 316 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 OR10R2Q8NGX6 335 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 SUN5Q8TC36 379 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 PDCD6IPQ8WUM4 868 aaKnown RBP3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 BAALCQ8WXS3 180 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 VSIG2Q96IQ7 327 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 RNF170Q96K19 258 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 ZNF184Q99676 751 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 RIOK2Q9BVS4 552 aaKnown RBP3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 OSBPL10Q9BXB5 764 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 KIR3DX1Q9H7L2 352 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 IL26Q9NPH9 171 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 STMN3Q9NZ72 180 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 GGA2Q9UJY4 613 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 MSH6P52701 1360 aa3.72□□□□□ -1.81
HMGB1P26-201ENST00000452520 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 A0A0G2JLM5 398 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 DPM1O60762 260 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZNF780AO75290 641 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 MPDU1O75352 247 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 VAPBO95292 243 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 TDP2O95551 362 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 IGHV3-48P01763 117 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CT45A6P0DMU7 189 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CT45A5P0DMU8 189 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CT45A7P0DMV0 189 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZP3P21754 424 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CSNK1A1P48729 337 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 MAP3K7CLP57077 242 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CSNK1G2P78368 415 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CT45A1Q5HYN5 189 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 PAGE2BQ5JRK9 111 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 MARC1Q5VT66 337 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CGB2Q6NT52 195 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 PRMT9Q6P2P2 845 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 MOB1BQ7L9L4 216 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 TMEM135Q86UB9 458 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CD302Q8IX05 232 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 KIF2BQ8N4N8 673 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZADH2Q8N4Q0 377 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 TMEM252Q8N6L7 170 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZNF740Q8NDX6 193 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 VN1R2Q8NFZ6 395 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CLHC1Q8NHS4 586 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CT45A3Q8NHU0 189 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 ANGPTL6Q8NI99 470 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 ACER1Q8TDN7 264 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 SDR42E1Q8WUS8 393 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 EEF1AKMT3Q96AZ1 226 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CPB2Q96IY4 423 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 COL21A1Q96P44 957 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 LZTS2Q9BRK4 669 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CNPY3Q9BT09 278 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 SRMSQ9H3Y6 488 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CD209Q9NNX6 404 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 CTPS2Q9NRF8 586 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 MCUBQ9NWR8 336 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 APOBEC3BQ9UH17 382 aaKnown RBP3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 C15orf41Q9Y2V0 281 aa3.71□□□□□ -1.82
HMGB1P26-201ENST00000452520 LRRK1Q38SD2 2015 aa3.7□□□□□ -1.82
HMGB1P26-201ENST00000452520 IGKV1D-13A0A0B4J2D9 117 aa3.7□□□□□ -1.82
HMGB1P26-201ENST00000452520 A0A1W2PRF3 423 aa3.7□□□□□ -1.82
HMGB1P26-201ENST00000452520 A0A1W2PRM7 423 aa3.7□□□□□ -1.82
HMGB1P26-201ENST00000452520 SMKR1H3BMG3 65 aa3.7□□□□□ -1.82
HMGB1P26-201ENST00000452520 RAD51CO43502 376 aa3.7□□□□□ -1.82
HMGB1P26-201ENST00000452520 SMC2O95347 1197 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms