RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 LIPHQ8WWY8 451 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 POM121L2Q96KW2 1035 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 DIRC2Q96SL1 478 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 GAL3ST1Q99999 423 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 NTN4Q9HB63 628 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 INIPQ9NRY2 104 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 EIF3KQ9UBQ5 218 aaKnown RBP9.25□□□□□ -0.93
USP1-204ENST00000452143 ZDHHC8Q9ULC8 765 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
USP1-204ENST00000452143 OR7A10O76100 309 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 UBOX5O94941 541 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 OR5F1O95221 314 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 SLC2A10O95528 541 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 FSHBP01225 129 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 IGHV1-46P01743 117 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 THRBP10828 461 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 ZNF32P17041 273 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 FUT1P19526 365 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 WNT5AP41221 380 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 CRYBA2P53672 197 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 TAS2R41P59536 307 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 NFYCQ13952 458 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 TAF11Q15544 211 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 TSTQ16762 297 aaKnown RBP9.24□□□□□ -0.93
USP1-204ENST00000452143 VMACQ2NL98 169 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 BEND6Q5SZJ8 279 aaPredicted RBP9.24□□□□□ -0.93
USP1-204ENST00000452143 TREML1Q86YW5 311 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 ALDH16A1Q8IZ83 802 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 FNDC8Q8TC99 324 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 CCL17Q92583 94 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 GTF3AQ92664 365 aaKnown RBP9.24□□□□□ -0.93
USP1-204ENST00000452143 NABP1Q96AH0 204 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
USP1-204ENST00000452143 SGTBQ96EQ0 304 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 MARS2Q96GW9 593 aaKnown RBP9.24□□□□□ -0.93
USP1-204ENST00000452143 SLC6A7Q99884 636 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 NANOGQ9H9S0 305 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 BAG5Q9UL15 447 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 UGT2A1Q9Y4X1 527 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 CACNG2Q9Y698 323 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 ARHGAP32A7KAX9 2087 aa9.24□□□□□ -0.93
USP1-204ENST00000452143 ISPDA4D126 451 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 C5orf49A4QMS7 147 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 HTR3EA5X5Y0 456 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 ZSCAN5BA6NJL1 495 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 WIPF1O43516 503 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 SPRY3O43610 288 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 FOXH1O75593 365 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 PRSS23O95084 383 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 CD55P08174 381 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 EGR1P18146 543 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 ADRA2CP18825 462 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 MAKP20794 623 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 CCNOP22674 350 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 FPR2P25090 351 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 CDAP32320 146 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 AQP2P41181 271 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 GDI2P50395 445 aaKnown RBP9.23□□□□□ -0.93
USP1-204ENST00000452143 PCBD1P61457 104 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 CD47Q08722 323 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 AWAT1Q58HT5 328 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 FAM27BQ5VT28 67 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 FAM205BPQ63HN1 556 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 RFPL4BQ6ZWI9 263 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 OR10A6Q8NH74 314 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 PFN4Q8NHR9 129 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 SLC25A40Q8TBP6 338 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 KLF14Q8TD94 323 aaPredicted RBP9.23□□□□□ -0.93
USP1-204ENST00000452143 ST7LQ8TDW4 575 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 TMEM255BQ8WV15 326 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 TMEM239Q8WW34 195 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 DYDC1Q8WWB3 177 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 SH3GL1Q99961 368 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 SIKE1Q9BRV8 207 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 ALG12Q9BV10 488 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 TXNIPQ9H3M7 391 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 ZMAT3Q9HA38 289 aaKnown RBP9.23□□□□□ -0.93
USP1-204ENST00000452143 C20orf141Q9NUB4 165 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 DDX28Q9NUL7 540 aaKnown RBP9.23□□□□□ -0.93
USP1-204ENST00000452143 HIF3AQ9Y2N7 669 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 SH3GLB1Q9Y371 365 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 MED31Q9Y3C7 131 aa9.23□□□□□ -0.93
USP1-204ENST00000452143 LOC100509620A0A075B734 347 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 IGHMP01871 453 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 CST2P09228 141 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 MPV17P39210 176 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 GZMMP51124 257 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ARHGDIAP52565 204 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 UBA52P62987 128 aaKnown RBP9.22□□□□□ -0.93
USP1-204ENST00000452143 ERVK-25P63136 954 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 PSG4Q00888 419 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 FMODQ06828 376 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ALG10Q5BKT4 473 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 TMEM255AQ5JRV8 349 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 SPATA46Q5T0L3 261 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 THEM4Q5T1C6 240 aa9.22□□□□□ -0.93
USP1-204ENST00000452143 ARL9Q6T311 187 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms