RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ABHD6Q9BV23 337 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 MROQ9BYG7 248 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 SLCO1C1Q9NYB5 712 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ZNF716A6NP11 495 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 TMCC2O75069 709 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ACTL6AO96019 429 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 BMXP51813 675 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ZNF133P52736 654 aaPredicted RBP12.66□□□□□ -0.38
USP39-207ENST00000450066 LRRC69Q6ZNQ3 347 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 NEIL3Q8TAT5 605 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 C11orf40Q8WZ69 217 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ROBO4Q8WZ75 1007 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 ABTB1Q969K4 478 aaPredicted RBP12.66□□□□□ -0.38
USP39-207ENST00000450066 INTS12Q96CB8 462 aaKnown RBP12.66□□□□□ -0.38
USP39-207ENST00000450066 SMAD5Q99717 465 aaKnown RBP12.66□□□□□ -0.38
USP39-207ENST00000450066 SCNM1Q9BWG6 230 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 RCE1Q9Y256 329 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 FLVCR1Q9Y5Y0 555 aa12.66□□□□□ -0.38
USP39-207ENST00000450066 TRAV17A0A0B4J275 112 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 DLL1O00548 723 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 CYTIPO60759 359 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 RPP14O95059 124 aaKnown RBP12.65□□□□□ -0.38
USP39-207ENST00000450066 SPINK2P20155 84 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 OPRL1P41146 370 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
USP39-207ENST00000450066 MXD1Q05195 221 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 OR10H5Q8NGA6 315 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 OR6N1Q8NGY5 312 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 OR52N5Q8NH56 324 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
USP39-207ENST00000450066 TPK1Q9H3S4 243 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 ZDHHC11Q9H8X9 412 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 ELOVL3Q9HB03 270 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 PAQR5Q9NXK6 330 aaPredicted RBP12.65□□□□□ -0.38
USP39-207ENST00000450066 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 WASF3Q9UPY6 502 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 CEP295Q9C0D2 2601 aa12.65□□□□□ -0.38
USP39-207ENST00000450066 A0A075B6Q4 140 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 A0A1W2PPL8 197 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 SELENOPP49908 381 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.39
USP39-207ENST00000450066 KCNMB1Q16558 191 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 ZNF829Q3KNS6 432 aaPredicted RBP12.65□□□□□ -0.39
USP39-207ENST00000450066 ACSM3Q53FZ2 586 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 RNFT1Q5M7Z0 435 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 C10orf128Q5T292 105 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 FDX2Q6P4F2 183 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 FCRLAQ7L513 359 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 CEACAM19Q7Z692 300 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 KRT77Q7Z794 578 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 ST7LQ8TDW4 575 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 S100ZQ8WXG8 99 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 HSD17B8Q92506 261 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 PDCD1LG2Q9BQ51 273 aa12.65□□□□□ -0.39
USP39-207ENST00000450066 C6orf62Q9GZU0 229 aaPredicted RBP12.65□□□□□ -0.39
USP39-207ENST00000450066 FOXD3Q9UJU5 478 aaPredicted RBP12.65□□□□□ -0.39
USP39-207ENST00000450066 SPTBN2O15020 2390 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 DVL2O14641 736 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 ZFPL1O95159 310 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 SRYQ05066 204 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 RASGEF1BQ0VAM2 473 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 DCTN2Q13561 401 aaKnown RBP12.64□□□□□ -0.39
USP39-207ENST00000450066 ALKBH1Q13686 389 aaKnown RBP12.64□□□□□ -0.39
USP39-207ENST00000450066 DEGS2Q6QHC5 323 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 C20orf196Q8IYI0 205 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 TEX19Q8NA77 164 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 SNIP1Q8TAD8 396 aaKnown RBP12.64□□□□□ -0.39
USP39-207ENST00000450066 RNF128Q8TEB7 428 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 SEC61A2Q9H9S3 476 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 FRRS1LQ9P0K9 344 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 ZNF281Q9Y2X9 895 aa12.64□□□□□ -0.39
USP39-207ENST00000450066 CASKO14936 926 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 ZNF254O75437 659 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 ITGB2P05107 769 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 CLEC2LP0C7M8 214 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 CALRP27797 417 aaKnown RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 MTNR1BP49286 362 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 YIF1BQ5BJH7 314 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 LINC00346Q8IVM7 164 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 OR2G2Q8NGZ5 317 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 DEFB127Q9H1M4 99 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 PPIL3Q9H2H8 161 aaKnown RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 LDAHQ9H6V9 325 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 PLGRKTQ9HBL7 147 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 HMG20AQ9NP66 347 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 AKIP1Q9NQ31 210 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 CRNNQ9UBG3 495 aaPredicted RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 UGT2A1Q9Y4X1 527 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms