RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF224Q9NZL3 707 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 COA3Q9Y2R0 106 aaPredicted RBP12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 IQCMA0A1B0GVH7 501 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 RIIAD1A6NNX1 92 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 C12orf71A8MTZ7 269 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 SERPINA5P05154 406 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 IGFBP1P08833 259 aaPredicted RBP12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 CST2P09228 141 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 OSMP13725 252 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 FABP6P51161 128 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 FBXL14Q8N1E6 418 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 SVOPLQ8N434 492 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 OR4F15Q8NGB8 312 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 FGFBP3Q8TAT2 258 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 SMAP2Q8WU79 429 aaPredicted RBP12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 CENPNQ96H22 339 aaPredicted RBP12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 FOXN4Q96NZ1 517 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 SEMA6AQ9H2E6 1030 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 C1orf198Q9H425 327 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 NOX3Q9HBY0 568 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 POLE4Q9NR33 117 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 PAPOLBQ9NRJ5 636 aaKnown RBP12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 REV1Q9UBZ9 1251 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 POLR1DQ9Y2S0 133 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
GTF3C3-206ENST00000448539 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 HLA-DQA2P01906 255 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 CD53P19397 219 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 CALCRP30988 508 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 GRK5P34947 590 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 GALK2Q01415 458 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 GLO1Q04760 184 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 ZSCAN26Q16670 478 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 PGGHGQ32M88 737 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 SLC27A4Q6P1M0 643 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 ALDH16A1Q8IZ83 802 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 NPEPL1Q8NDH3 523 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 ICA1LQ8NDH6 482 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 OR2T4Q8NH00 348 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 OR4Q3Q8NH05 313 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 TSSK2Q96PF2 358 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 DHRS9Q9BPW9 319 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 WACQ9BTA9 647 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 FN3KQ9H479 309 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 EMC7Q9NPA0 242 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 BEX4Q9NWD9 120 aaPredicted RBP12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 B9D1Q9UPM9 204 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 TIMM10BQ9Y5J6 103 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 FKBP7Q9Y680 259 aa12.17□□□□□ -0.46
GTF3C3-206ENST00000448539 OR6C68A6NDL8 312 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 E7EQL1 145 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 SMPD2O60906 423 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 TMCC2O75069 709 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 TP53P04637 393 aaPredicted RBP12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 HMGN1P05114 100 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 MMP7P09237 267 aaPredicted RBP12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF3P17036 446 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF32P17041 273 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 APLNRP35414 380 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 SCRN3Q0VDG4 424 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 GINS1Q14691 196 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 DEFB113Q30KQ7 82 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 PABPC1L2AQ5JQF8 200 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF544Q6NX49 715 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 FAHD1Q6P587 224 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 VHLLQ6RSH7 139 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 SYT9Q86SS6 491 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 MYPOPQ86VE0 399 aaPredicted RBP12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 OR6V1Q8N148 313 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 IQCF1Q8N6M8 205 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 CYB561A3Q8NBI2 242 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 SLC37A3Q8NCC5 494 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 SLC30A7Q8NEW0 376 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 OR10H5Q8NGA6 315 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 STMN2Q93045 179 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 MBD6Q96DN6 1003 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 FBXO17Q96EF6 278 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 PLEKHA8Q96JA3 519 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF75AQ96N20 296 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF416Q9BWM5 594 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 RACGAP1Q9H0H5 632 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 CDH20Q9HBT6 801 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 KRT84Q9NSB2 600 aa12.16□□□□□ -0.46
GTF3C3-206ENST00000448539 IGLV1-36A0A0B4J1U3 117 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 FAM171A2A8MVW0 826 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 MPZL1O95297 269 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 SCG5P05408 212 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms