RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PRPF19Q9UMS4 504 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 A0A096LNT2 108 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 TEX13CA0A0J9YWL9 993 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 SOCS2O14508 198 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 IMPA2O14732 288 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 KRT36O76013 467 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 SNAP29O95721 258 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 ADRA2AP08913 450 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 FAM157BP0CG42 384 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 CTLA4P16410 223 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 SDHAP31040 664 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 APLNRP35414 380 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 CDKN2AP42771 156 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 GUCA1AP43080 201 aaPredicted RBP10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 MAGEA2P43356 314 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 GSSP48637 474 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 EVX1P49640 407 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 PSG4Q00888 419 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 HSF2Q03933 536 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 KRTAP1-1Q07627 177 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 KRR1Q13601 381 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 ENDOGQ14249 297 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 RFX4Q33E94 735 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 UGT2A3Q6UWM9 527 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 PTCHD4Q6ZW05 846 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 C10orf105Q8TEF2 133 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 FOXN4Q96NZ1 517 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 SYT3Q9BQG1 590 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 THTPAQ9BU02 230 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 OR2H1Q9GZK4 316 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 LRMDAQ9H2I8 198 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 OR51B6Q9H340 312 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 FZR1Q9UM11 496 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 TIMM10BQ9Y5J6 103 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 FKBP7Q9Y680 259 aa10.96□□□□□ -0.65
PRPF40A-203ENST00000448428 LOC100509620A0A075B734 347 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 SYNGR3O43761 229 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 UBOX5O94941 541 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 PPP1R3DO95685 299 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 TXNDC12O95881 172 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 MSR1P21757 451 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 FPR3P25089 353 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 STOMP27105 288 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 PCSK6P29122 969 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 IFNGR2P38484 337 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 RAD52P43351 418 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 RPS6KA3P51812 740 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 UCP2P55851 309 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 RPS23P62266 143 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 PGBD2Q6P3X8 592 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 GNPDA2Q8TDQ7 276 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 POM121Q96HA1 1249 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 POM121L2Q96KW2 1035 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 ERMAPQ96PL5 475 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 WNT5BQ9H1J7 359 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 SYT4Q9H2B2 425 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 OR52D1Q9H346 318 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 RERGLQ9H628 205 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 MAGIXQ9H6Y5 334 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 DYNLRB1Q9NP97 96 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 EMC7Q9NPA0 242 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 POLE4Q9NR33 117 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 VSX1Q9NZR4 365 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 MYEF2Q9P2K5 600 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 REV1Q9UBZ9 1251 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 DUSP13Q9UII6 198 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 COA3Q9Y2R0 106 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 LYVE1Q9Y5Y7 322 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 MTORP42345 2549 aa10.95□□□□□ -0.66
PRPF40A-203ENST00000448428 C12orf71A8MTZ7 269 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 TNFRSF11BO00300 401 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 ACOT8O14734 319 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 SLC16A7O60669 478 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 KHDRBS3O75525 346 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 MPZL1O95297 269 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 CLPTM1O96005 669 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 LCKP06239 509 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 CSF3P09919 207 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 APEHP13798 732 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 SLC25A16P16260 332 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 CCNOP22674 350 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 SLC6A6P31641 620 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 PDLIM4P50479 330 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 PCBD1P61457 104 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 ERVS71-1P61550 626 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 TSPAN31Q12999 210 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 OTPQ5XKR4 325 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 RGS7BPQ6MZT1 257 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF774Q6NX45 483 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 SYT9Q86SS6 491 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 ADCK1Q86TW2 530 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 ALDH16A1Q8IZ83 802 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 OR4C15Q8NGM1 316 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 FANK1Q8TC84 345 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 NEU4Q8WWR8 484 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 CCDC124Q96CT7 223 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms