RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	RNF141	Q8WVD5	230 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	RGP1	Q92546	391 aa	Predicted RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TSLP	Q969D9	159 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZBTB8A	Q96BR9	441 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	KIRREL1	Q96J84	757 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	LOXL4	Q96JB6	756 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	JSRP1	Q96MG2	331 aa	Predicted RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	LYSMD1	Q96S90	227 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MRPL57	Q9BQC6	102 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MIEN1	Q9BRT3	115 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	VCX2	Q9H322	139 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	PRDM12	Q9H4Q4	367 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF552	Q9H707	407 aa	Predicted RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	HMX1	Q9NP08	348 aa	Predicted RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	YAE1D1	Q9NRH1	226 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	HEBP1	Q9NRV9	189 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF226	Q9NYT6	803 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MRPL15	Q9P015	296 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	CLEC4E	Q9ULY5	219 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ST3GAL6	Q9Y274	331 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TRAV39	A0A0B4J263	110 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329		J3KR12	359 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	CORT	O00230	105 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	WNT9A	O14904	365 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	SEPT4	O43236	478 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MMP23A	O75900	390 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MATN4	O95460	622 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ACP2	P11117	423 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	CSNK1A1	P48729	337 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR12D2	P58182	307 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	UBE2M	P61081	183 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	RPS23	P62266	143 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	RPS25	P62851	125 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TTLL4	Q14679	1199 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	RHEB	Q15382	184 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TEAD2	Q15562	447 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	NKPD1	Q17RQ9	610 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	C2orf68	Q2NKX9	166 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TMEM268	Q5VZI3	342 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	STEAP4	Q687X5	459 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	SPATA19	Q7Z5L4	167 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	FBXO39	Q8N4B4	442 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TTC9B	Q8N6N2	239 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MRPL43	Q8N983	215 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ACVR1C	Q8NER5	493 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	MITD1	Q8WV92	249 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	RLN3	Q8WXF3	142 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ARNTL2	Q8WYA1	636 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	FRZB	Q92765	325 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	CIB3	Q96Q77	187 aa	Predicted RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	UCN2	Q96RP3	112 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	LPAR4	Q99677	370 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	WRAP53	Q9BUR4	548 aa	Known RBP	6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	ALG12	Q9BV10	488 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	XYLT2	Q9H1B5	865 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	CXorf36	Q9H7Y0	433 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR6C3	Q9NZP0	311 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	HDGFL3	Q9Y3E1	203 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	COX11	Q9Y6N1	276 aa		6.18	□□□□□ -1.42
TRIM6-205	ENST00000445329	TRAV30	A0A087WSZ9	112 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329		A0A087WZ62	844 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	UNC119B	A6NIH7	251 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	GJE1	A6NN92	205 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	DCTN6	O00399	190 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	ALOX12B	O75342	701 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	EIF4E	P06730	217 aa	Known RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	CTSB	P07858	339 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	PSG1	P11464	419 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	CYBA	P13498	195 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	HGF	P14210	728 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	PSMB1	P20618	241 aa	Known RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	MSR1	P21757	451 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	RBMS1	P29558	406 aa	Known RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	MC4R	P32245	332 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	DLST	P36957	453 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	MVD	P53602	400 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	DGCR2	P98153	550 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	FABP5	Q01469	135 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	IL10RB	Q08334	325 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	ATXN7L3	Q14CW9	347 aa	Predicted RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	SNAI3	Q3KNW1	292 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	DUSP28	Q4G0W2	176 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF626	Q68DY1	528 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	WDR53	Q7Z5U6	358 aa	Predicted RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	TMEM183A	Q8IXX5	376 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	KCNRG	Q8N5I3	272 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	LRRN4	Q8WUT4	740 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	DVL3	Q92997	716 aa	Predicted RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	FAM46A	Q96IP4	442 aa	Known RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	SPATA33	Q96N06	139 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZFP3	Q96NJ6	502 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	MCEE	Q96PE7	176 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR2V2	Q96R30	315 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	TAAR6	Q96RI8	345 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	SEMA4G	Q9NTN9	838 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	PILRB	Q9UKJ0	227 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	LSM2	Q9Y333	95 aa	Known RBP	6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	PPIAL4E	A0A075B759	164 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	IGKV6D-21	A0A0A0MT36	114 aa		6.17	□□□□□ -1.42
TRIM6-205	ENST00000445329	PPIAL4C	A0A0B4J2A2	164 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms