RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 FAM98BQ52LJ0 330 aaKnown RBP16.06■□□□□ 0.16
CCDC188-202ENST00000444532 PABPC1L2AQ5JQF8 200 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 SYT9Q86SS6 491 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 SVOPLQ8N434 492 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 GNPDA2Q8TDQ7 276 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 MRPL24Q96A35 216 aaKnown RBP16.06■□□□□ 0.16
CCDC188-202ENST00000444532 RASD2Q96D21 266 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 LRGUKQ96M69 825 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 SORCS2Q96PQ0 1159 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 VRK1Q99986 396 aaPredicted RBP16.06■□□□□ 0.16
CCDC188-202ENST00000444532 WACQ9BTA9 647 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 THTPAQ9BU02 230 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 TRIM15Q9C019 465 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 RAB1BQ9H0U4 201 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 IL20RAQ9UHF4 553 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 LYVE1Q9Y5Y7 322 aa16.06■□□□□ 0.16
CCDC188-202ENST00000444532 C12orf71A8MTZ7 269 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 TNFRSF11BO00300 401 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 IMPA2O14732 288 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 GPRIN2O60269 458 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 UBOX5O94941 541 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 ZNF32P17041 273 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 MSR1P21757 451 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 PCSK6P29122 969 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 SLC6A6P31641 620 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 APLNRP35414 380 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 ALDH16A1Q8IZ83 802 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 CPEB3Q8NE35 698 aaKnown RBP16.05■□□□□ 0.16
CCDC188-202ENST00000444532 FANK1Q8TC84 345 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 CLPTM1LQ96KA5 538 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 OR52D1Q9H346 318 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 VSX1Q9NZR4 365 aaPredicted RBP16.05■□□□□ 0.16
CCDC188-202ENST00000444532 TIMM10BQ9Y5J6 103 aa16.05■□□□□ 0.16
CCDC188-202ENST00000444532 NF1P21359 2839 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 NIPBLQ6KC79 2804 aaeCLIP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 SOCS2O14508 198 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 ACOT8O14734 319 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 ARPC3O15145 178 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 GYG2O15488 501 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 ERCC1P07992 297 aaPredicted RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 CCL2P13500 99 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 STOMP27105 288 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 APEX1P27695 318 aaKnown RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 RAD52P43351 418 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 PSG4Q00888 419 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 DNAL1Q4LDG9 190 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 PGBD2Q6P3X8 592 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 PAQR4Q8N4S7 273 aaPredicted RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 ZNF525Q8N782 197 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 FAM168AQ92567 244 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 CCDC124Q96CT7 223 aaKnown RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 ERMAPQ96PL5 475 aaPredicted RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 MRPL37Q9BZE1 423 aaKnown RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 MYOZ1Q9NP98 299 aaPredicted RBP16.04■□□□□ 0.16
CCDC188-202ENST00000444532 POLE4Q9NR33 117 aa16.04■□□□□ 0.16
CCDC188-202ENST00000444532 ZANQ9Y493 2812 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 IGHV4-30-2A0A087WSY4 118 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 SYNGR3O43761 229 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 IDH3BO43837 385 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 SLC16A7O60669 478 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 KHDRBS3O75525 346 aaKnown RBP16.03■□□□□ 0.16
CCDC188-202ENST00000444532 SLC25A16P16260 332 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 CTLA4P16410 223 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 CDKN2AP42771 156 aaKnown RBP16.03■□□□□ 0.16
CCDC188-202ENST00000444532 UCP2P55851 309 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 ENDOGQ14249 297 aaKnown RBP16.03■□□□□ 0.16
CCDC188-202ENST00000444532 MSMPQ1L6U9 139 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 OR2T5Q6IEZ7 315 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 PTCHD4Q6ZW05 846 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 OR4C15Q8NGM1 316 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 OR2T29Q8NH02 315 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 C10orf105Q8TEF2 133 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 NEU4Q8WWR8 484 aaPredicted RBP16.03■□□□□ 0.16
CCDC188-202ENST00000444532 POM121L2Q96KW2 1035 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 ZNF416Q9BWM5 594 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 BCL2L14Q9BZR8 327 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 OR2H1Q9GZK4 316 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 SYT4Q9H2B2 425 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 DYNLRB1Q9NP97 96 aa16.03■□□□□ 0.16
CCDC188-202ENST00000444532 AQP12BA6NM10 295 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 LY6HO94772 140 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 CCNB2O95067 398 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 PPP1R3DO95685 299 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 SCG5P05408 212 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 FAM157BP0CG42 384 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 RAP2AP10114 183 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 HOXB6P17509 224 aaKnown RBP16.02■□□□□ 0.16
CCDC188-202ENST00000444532 PDLIM4P50479 330 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 SELENOVP59797 346 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 RGS7BPQ6MZT1 257 aaPredicted RBP16.02■□□□□ 0.16
CCDC188-202ENST00000444532 RPL13AP3Q6NVV1 102 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 UNQ6126/PRO20091Q6UXV3 157 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 ZNF620Q6ZNG0 422 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 Q71RC1 249 aaPredicted RBP16.02■□□□□ 0.16
CCDC188-202ENST00000444532 GLB1L2Q8IW92 636 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 AQP12AQ8IXF9 295 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 AKR7LQ8NHP1 331 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 C11orf40Q8WZ69 217 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 SLC7A6OSQ96CW6 309 aaPredicted RBP16.02■□□□□ 0.16
CCDC188-202ENST00000444532 SAMD8Q96LT4 415 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms