RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CISD3P0C7P0 127 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 ZNF823P16415 610 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 MPGP29372 298 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 RASGEF1BQ0VAM2 473 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PPP1R1AQ13522 171 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 WDR38Q5JTN6 314 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 FBXO42Q6P3S6 717 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SLC36A1Q7Z2H8 476 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 KDM8Q8N371 416 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 TCEAL3Q969E4 200 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 CMTM3Q96MX0 182 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 ZNF285Q96NJ3 590 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 MOGAT1Q96PD6 335 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SLC25A21Q9BQT8 299 aaPredicted RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 MENTQ9BUN1 341 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 OR8D2Q9GZM6 311 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PRMT8Q9NR22 394 aaPredicted RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 DNAJB12Q9NXW2 375 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 MRPS33Q9Y291 106 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 RPH3AQ9Y2J0 694 aaPredicted RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 SLC22A7Q9Y694 548 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SPAG17Q6Q759 2223 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 HRKO00198 91 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 ZNF749O43361 778 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 EML2O95834 649 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 CD80P33681 288 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 SERPINF1P36955 418 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 CASRP41180 1078 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 ZNF616Q08AN1 781 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 EBPQ15125 230 aaKnown RBP8.21□□□□□ -1.09
COPB1-202ENST00000439561 EXOSC6Q5RKV6 272 aaKnown RBP8.21□□□□□ -1.09
COPB1-202ENST00000439561 ATPAF1Q5TC12 328 aaPredicted RBP8.21□□□□□ -1.09
COPB1-202ENST00000439561 NKAIN2Q5VXU1 208 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 LCN10Q6JVE6 187 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 GVQW1Q8N7I0 195 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 RCBTB1Q8NDN9 531 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 CD300LFQ8TDQ1 290 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 FAM3CQ92520 227 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 APOOQ9BUR5 198 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 CERS4Q9HA82 394 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 ZNF304Q9HCX3 659 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 EPHA6Q9UF33 1036 aa8.21□□□□□ -1.09
COPB1-202ENST00000439561 OR6C76A6NM76 312 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 SOX1O00570 391 aaPredicted RBP8.21□□□□□ -1.1
COPB1-202ENST00000439561 CLDN4O14493 209 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 PRH1P02810 166 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 CEACAM5P06731 702 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 ERCC1P07992 297 aaPredicted RBP8.21□□□□□ -1.1
COPB1-202ENST00000439561 HOXB5P09067 269 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 TSFMP43897 325 aaKnown RBP8.21□□□□□ -1.1
COPB1-202ENST00000439561 NPBWR1P48145 328 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 RIDAP52758 137 aaKnown RBP8.21□□□□□ -1.1
COPB1-202ENST00000439561 SLC35D3Q5M8T2 416 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 NUBPLQ8TB37 319 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 SPACA5Q96QH8 159 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 TLNRD1Q9H1K6 362 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 IGFLR1Q9H665 355 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 MED9Q9NWA0 146 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 EMC9Q9Y3B6 208 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 POM121BA6NF01 834 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 MOSPD3O75425 235 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 MST1P26927 711 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 OR3A2P47893 321 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 HOXA1P49639 335 aaPredicted RBP8.21□□□□□ -1.1
COPB1-202ENST00000439561 RPS21P63220 83 aaKnown RBP8.21□□□□□ -1.1
COPB1-202ENST00000439561 LILRA6Q6PI73 481 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 COX15Q7KZN9 410 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 MDGA2Q7Z553 956 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 LINC00346Q8IVM7 164 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 KCNRGQ8N5I3 272 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 OR5M8Q8NGP6 311 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 STACQ99469 402 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 TIMM29Q9BSF4 260 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 G6PC3Q9BUM1 346 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 CST11Q9H112 138 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 ACKR4Q9NPB9 350 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 ZFP57Q9NU63 452 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 SOHLH2Q9NX45 425 aa8.21□□□□□ -1.1
COPB1-202ENST00000439561 TCF20Q9UGU0 1960 aaKnown RBP8.2□□□□□ -1.1
COPB1-202ENST00000439561 RTTNQ86VV8 2226 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 TRAV14DV4A0A0A6YYC5 116 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 SERINC4A6NH21 518 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 KNG1P01042 644 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 RAB6AP20340 208 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 CPT2P23786 658 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 NPY4RP50391 375 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 DHODHQ02127 395 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 RPL18Q07020 188 aaKnown RBP8.2□□□□□ -1.1
COPB1-202ENST00000439561 PMPCAQ10713 525 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 ELOCQ15369 112 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 HLA-DQA1Q5Y7H0 255 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 SLC18B1Q6NT16 456 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 FAM180AQ6UWF9 173 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 DCBLD2Q96PD2 775 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 ADOQ96SZ5 270 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 PRRT1Q99946 306 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 ZNF275Q9NSD4 429 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms