RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ELOVL3Q9HB03 270 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 APMAPQ9HDC9 416 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 LANCL2Q9NS86 450 aa14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 ARID1BQ8NFD5 2236 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-203ENST00000439316 TRAV36DV7A0A075B6V5 113 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 CCDC163A0A0D9SF12 145 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 H0YIG0 161 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 GOSR2O14653 212 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 ICOSLGO75144 302 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 CD1CP29017 333 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 CCKBRP32239 447 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 MEP1BQ16820 701 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 C2orf76Q3KRA6 126 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 TEX30Q5JUR7 227 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 OR7E24Q6IFN5 339 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 KRT77Q7Z794 578 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 NAXDQ8IW45 347 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 CLEC1AQ8NC01 280 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 OR51S1Q8NGJ8 323 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 RNF128Q8TEB7 428 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 SCARB1Q8WTV0 552 aa14.77□□□□□ -0.04
CLCNKA-203ENST00000439316 TMEM272A0A1B0GTI8 110 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 WNT11O96014 354 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 GABRA1P14867 456 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 PRSS3P35030 304 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 RORAP35398 523 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 HNRNPKP61978 463 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 TAGLNQ01995 201 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 DCAF12L2Q5VW00 463 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ZNF679Q8IYX0 411 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 GPX8Q8TED1 209 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ASB13Q8WXK3 278 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 CLIP3Q96DZ5 547 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 CXorf58Q96LI9 332 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ADOQ96SZ5 270 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 PRMT8Q9NR22 394 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 PNO1Q9NRX1 252 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 MRTO4Q9UKD2 239 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 B9D1Q9UPM9 204 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 XKRYO14609 159 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 TPD52L2O43399 206 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 LAMTOR5O43504 91 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 CD3DP04234 171 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 PROS1P07225 676 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 MELTFP08582 738 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 FBXO45P0C2W1 286 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 TDGF1P13385 188 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 DHPSP49366 369 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ROM1Q03395 351 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 DEFB133Q30KQ1 61 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ZNF519Q8TB69 540 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ADIPOR1Q96A54 375 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 LINC00052Q96N35 136 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 PPA2Q9H2U2 334 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 C1orf198Q9H425 327 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 COQ3Q9NZJ6 369 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 EPHA6Q9UF33 1036 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC22A13Q9Y226 551 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 ASXL3Q9C0F0 2248 aa14.76□□□□□ -0.05
CLCNKA-203ENST00000439316 FXYD6-FXYD2A0A087WZ82 144 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 PRSS37A4D1T9 235 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 FITM1A5D6W6 292 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 MEIS3P1A6NDR6 274 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 C11orf98E9PRG8 122 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 PNPP00491 289 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 IGKV3-11P04433 115 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 ITGB2P05107 769 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 HOXD4P09016 255 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 CXCR1P25024 350 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 FASLGP48023 281 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 UBE2MP61081 183 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 OC90Q02509 493 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 TOMM34Q15785 309 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 SGCBQ16585 318 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 C1QL3Q5VWW1 255 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC18B1Q6NT16 456 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 STEAP1BQ6NZ63 245 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC35D2Q76EJ3 337 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 MAMDC2Q7Z304 686 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 PRR22Q8IZ63 422 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 METTL21AQ8WXB1 218 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC25A28Q96A46 364 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 PTDSS2Q9BVG9 487 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 C1QTNF6Q9BXI9 259 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 OR8D2Q9GZM6 311 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 ARL6Q9H0F7 186 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 FXYD6Q9H0Q3 95 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 ALX4Q9H161 411 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 MRPL22Q9NWU5 206 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 MED11Q9P086 117 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 MMACHCQ9Y4U1 282 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 PCDH15Q96QU1 1955 aa14.75□□□□□ -0.05
CLCNKA-203ENST00000439316 IGLV1-36A0A0B4J1U3 117 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 LMO7DNF2Z398 122 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 SULT1C2O00338 296 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 HCRTR2O43614 444 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 HLA-DQA2P01906 255 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 PRKACBP22694 351 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 MAP2K6P52564 334 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms