RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SORCS2Q96PQ0 1159 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 DOK1Q99704 481 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 GPA33Q99795 319 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 DYNLRB1Q9NP97 96 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 IL20RAQ9UHF4 553 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 IER3IP1Q9Y5U9 82 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 TNFRSF11BO00300 401 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 GPRIN2O60269 458 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 LY6G6DO95868 133 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 LAP3P28838 519 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 SLC6A6P31641 620 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 HMGA2P52926 109 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 FXYD6P3P58550 94 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 MS4A2Q01362 244 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 RFX4Q33E94 735 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 DNAL1Q4LDG9 190 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 C1orf94Q6P1W5 598 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 ALDH16A1Q8IZ83 802 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 ZNF525Q8N782 197 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 OR10H5Q8NGA6 315 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 GNPDA2Q8TDQ7 276 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 FAM168AQ92567 244 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 WACQ9BTA9 647 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 THTPAQ9BU02 230 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 TRIM15Q9C019 465 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 OR52D1Q9H346 318 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 MYOZ1Q9NP98 299 aaPredicted RBP21.32■■□□□ 1
RAPGEF1-206ENST00000438647 LYVE1Q9Y5Y7 322 aa21.32■■□□□ 1
RAPGEF1-206ENST00000438647 C12orf71A8MTZ7 269 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 TXNDC12O95881 172 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 RAD52P43351 418 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 TSPAN31Q12999 210 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 SYT9Q86SS6 491 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 MRPL37Q9BZE1 423 aaKnown RBP21.31■■□□□ 1
RAPGEF1-206ENST00000438647 BCL2L14Q9BZR8 327 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 POLE4Q9NR33 117 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 VSX1Q9NZR4 365 aaPredicted RBP21.31■■□□□ 1
RAPGEF1-206ENST00000438647 TIMM10BQ9Y5J6 103 aa21.31■■□□□ 1
RAPGEF1-206ENST00000438647 IGHV4-30-2A0A087WSY4 118 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 TMEM129A0AVI4 362 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 SOCS2O14508 198 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 IMPA2O14732 288 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 GYG2O15488 501 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 UBOX5O94941 541 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 CCL2P13500 99 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 SLC25A16P16260 332 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 STOMP27105 288 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 APEX1P27695 318 aaKnown RBP21.3■■□□□ 1
RAPGEF1-206ENST00000438647 PCSK6P29122 969 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 GSSP48637 474 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 TRAP1Q12931 704 aaKnown RBP21.3■■□□□ 1
RAPGEF1-206ENST00000438647 RGS7BPQ6MZT1 257 aaPredicted RBP21.3■■□□□ 1
RAPGEF1-206ENST00000438647 PGBD2Q6P3X8 592 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 UNQ6126/PRO20091Q6UXV3 157 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 CLPTM1LQ96KA5 538 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 ERMAPQ96PL5 475 aaPredicted RBP21.3■■□□□ 1
RAPGEF1-206ENST00000438647 SYT4Q9H2B2 425 aa21.3■■□□□ 1
RAPGEF1-206ENST00000438647 SYNGR3O43761 229 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 KHDRBS3O75525 346 aaKnown RBP21.29■■□□□ 1
RAPGEF1-206ENST00000438647 CTLA4P16410 223 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 PDLIM4P50479 330 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 SELENOVP59797 346 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 PSG4Q00888 419 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 RPL13AP3Q6NVV1 102 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 DNM1P34Q6PK57 102 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 Q71RC1 249 aaPredicted RBP21.29■■□□□ 1
RAPGEF1-206ENST00000438647 PAQR4Q8N4S7 273 aaPredicted RBP21.29■■□□□ 1
RAPGEF1-206ENST00000438647 CPEB3Q8NE35 698 aaKnown RBP21.29■■□□□ 1
RAPGEF1-206ENST00000438647 NEU4Q8WWR8 484 aaPredicted RBP21.29■■□□□ 1
RAPGEF1-206ENST00000438647 OR2H1Q9GZK4 316 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 CSPG4Q6UVK1 2322 aa21.29■■□□□ 1
RAPGEF1-206ENST00000438647 ZANQ9Y493 2812 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 M0R233 179 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 NDUFS8O00217 210 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 ARPC3O15145 178 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 SLC16A7O60669 478 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 PPP1R3DO95685 299 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 FAM157BP0CG42 384 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 HOXB6P17509 224 aaKnown RBP21.28■■□□□ 1
RAPGEF1-206ENST00000438647 CCNOP22674 350 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 GDI2P50395 445 aaKnown RBP21.28■■□□□ 1
RAPGEF1-206ENST00000438647 UCP2P55851 309 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 ZNF620Q6ZNG0 422 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 GLB1L2Q8IW92 636 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 AKR7LQ8NHP1 331 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 C10orf105Q8TEF2 133 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 SYT3Q9BQG1 590 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 IFT27Q9BW83 186 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 ZNF416Q9BWM5 594 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 MS4A5Q9H3V2 200 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 RERGLQ9H628 205 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 REEP1Q9H902 201 aa21.28■■□□□ 1
RAPGEF1-206ENST00000438647 EIF3KQ9UBQ5 218 aaKnown RBP21.28■■□□□ 1
RAPGEF1-206ENST00000438647 LY6HO94772 140 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 CCNB2O95067 398 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 LCKP06239 509 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 ADRA2AP08913 450 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 RAP2AP10114 183 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 NOS3P29474 1203 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 CRABP1P29762 137 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms