RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CRABP1P29762 137 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 ARR3P36575 388 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 CENPAP49450 140 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 CRISP1P54107 249 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 RAB1AP62820 205 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 CDK5Q00535 292 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 ENDOGQ14249 297 aaKnown RBP14.05□□□□□ -0.16
SNRPB-202ENST00000438552 UGT2A3Q6UWM9 527 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.05□□□□□ -0.16
SNRPB-202ENST00000438552 GLB1L2Q8IW92 636 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 OR6V1Q8N148 313 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 ZNF75AQ96N20 296 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 RACGAP1Q9H0H5 632 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 LIME1Q9H400 295 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 PLEKHF2Q9H8W4 249 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 RNF121Q9H920 327 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 SLC25A19Q9HC21 320 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 MOV10Q9HCE1 1003 aaKnown RBP14.05□□□□□ -0.16
SNRPB-202ENST00000438552 B9D1Q9UPM9 204 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 CSMD2Q7Z408 3487 aa14.05□□□□□ -0.16
SNRPB-202ENST00000438552 ANKRD17O75179 2603 aaKnown RBP14.05□□□□□ -0.16
SNRPB-202ENST00000438552 POLQO75417 2590 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 SHISA9B4DS77 424 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 ATP6V1G2-DDX39BF2Z307 99 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 IFNGP01579 166 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 MMP7P09237 267 aaPredicted RBP14.04□□□□□ -0.16
SNRPB-202ENST00000438552 GAAP10253 952 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 ZNF14P17017 642 aaPredicted RBP14.04□□□□□ -0.16
SNRPB-202ENST00000438552 ZNF3P17036 446 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 EPHA2P29317 976 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 PYCR1P32322 319 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 GUCA1AP43080 201 aaPredicted RBP14.04□□□□□ -0.16
SNRPB-202ENST00000438552 CDH11P55287 796 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 DAG1Q14118 895 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 RAB39AQ14964 217 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 RCN1Q15293 331 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 SLC36A2Q495M3 483 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 FAM27BQ5VT28 67 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 TMEM53Q6P2H8 277 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 SLC22A25Q6T423 547 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 FAM169BQ8N8A8 192 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 LILRB1Q8NHL6 650 aaPredicted RBP14.04□□□□□ -0.16
SNRPB-202ENST00000438552 FBXO17Q96EF6 278 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 DDOQ99489 341 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 RBM4BQ9BQ04 359 aaKnown RBP14.04□□□□□ -0.16
SNRPB-202ENST00000438552 RBM4Q9BWF3 364 aaKnown RBP14.04□□□□□ -0.16
SNRPB-202ENST00000438552 ZNF416Q9BWM5 594 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 OSBPL10Q9BXB5 764 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 MED20Q9H944 212 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 MOKQ9UQ07 419 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 FKBP7Q9Y680 259 aa14.04□□□□□ -0.16
SNRPB-202ENST00000438552 PDZD2O15018 2839 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 FAM183AA6NL82 134 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 SURF4O15260 269 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 MGRN1O60291 552 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 ALPLP05186 524 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 GYPBP06028 91 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 CST2P09228 141 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 CLUP10909 449 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 ZNF32P17041 273 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 PAX7P23759 505 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 CALCRP30988 508 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 ESRRGP62508 458 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 NAAAQ02083 359 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 PTGES3Q15185 160 aaKnown RBP14.03□□□□□ -0.16
SNRPB-202ENST00000438552 MEP1BQ16820 701 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 C3orf36Q3SXR2 165 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 B3GLCTQ6Y288 498 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 DPPA2Q7Z7J5 298 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 ZBTB46Q86UZ6 589 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 ZNF584Q8IVC4 421 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 CBR4Q8N4T8 237 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 PROKR2Q8NFJ6 384 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 OR51L1Q8NGJ5 315 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 ZNRF4Q8WWF5 429 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 C11orf40Q8WZ69 217 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 AKAP1Q92667 903 aaKnown RBP eCLIP14.03□□□□□ -0.163e-10■■□□□ 14.2
SNRPB-202ENST00000438552 OTULINQ96BN8 352 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 RADILQ96JH8 1075 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 KCNS3Q9BQ31 491 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 HCAR1Q9BXC0 346 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 NMNAT2Q9BZQ4 307 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 KCNN2Q9H2S1 579 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 RIBC2Q9H4K1 309 aa14.03□□□□□ -0.16
SNRPB-202ENST00000438552 H0YHG0 523 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 M0R129 80 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 HS3ST1O14792 307 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 SPI1P17947 270 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 ELF3P78545 371 aaPredicted RBP14.02□□□□□ -0.17
SNRPB-202ENST00000438552 GLO1Q04760 184 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 ZNF672Q499Z4 452 aaPredicted RBP14.02□□□□□ -0.17
SNRPB-202ENST00000438552 PABPC1L2AQ5JQF8 200 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 LYPD4Q6UWN0 246 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 SLC26A10Q8NG04 563 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 OR2T4Q8NH00 348 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 AKR7LQ8NHP1 331 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 C9orf16Q9BUW7 83 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 GABARAPL3Q9BY60 117 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 USE1Q9NZ43 259 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms