RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 RUNDC3AQ59EK9 446 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 DCAF12L2Q5VW00 463 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 LRFN4Q6PJG9 635 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 ARL9Q6T311 187 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 DLEU7Q6UYE1 221 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 RBMS3Q6XE24 437 aaKnown RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 WDR88Q6ZMY6 472 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 USP51Q70EK9 711 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 CARM1Q86X55 608 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 PTOV1Q86YD1 416 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 LRRC18Q8N456 261 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 DPP10Q8N608 796 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 LRRC17Q8N6Y2 441 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 GPR32P1Q8NGA4 272 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 OR1J1Q8NGS3 322 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 YIPF5Q969M3 257 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 MCHR2Q969V1 340 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 TAMM41Q96BW9 452 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 SGTBQ96EQ0 304 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 ELMOD3Q96FG2 381 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 THOC1Q96FV9 657 aaKnown RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 ATP6V1G3Q96LB4 118 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 ECSITQ9BQ95 431 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 RBM4Q9BWF3 364 aaKnown RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 SUCNR1Q9BXA5 334 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 NDEL1Q9GZM8 345 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 MRGBPQ9NV56 204 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 NKIRAS2Q9NYR9 191 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 UBAP1Q9NZ09 502 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 PCDHB10Q9UN67 800 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 SH3GLB1Q9Y371 365 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 MED31Q9Y3C7 131 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 TENM1Q9UKZ4 2725 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 IGLV3-9A0A075B6K5 115 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 LOC105371242A0A075B767 164 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 A0A0G2JND7 137 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 C5orf49A4QMS7 147 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 J3QLI3 93 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 TMPRSS2O15393 492 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 RP2O75695 350 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 VENTXO95231 258 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 CLPTM1O96005 669 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 MT-ND1P03886 318 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZNF250P15622 560 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ACADSP16219 412 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 TNFSF4P23510 183 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 GATA3P23771 443 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 FPR2P25090 351 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 STOMP27105 288 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 AQP2P41181 271 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 LIMS1P48059 325 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 PCBD1P61457 104 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 MRPS34P82930 218 aaKnown RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 RPL18Q07020 188 aaKnown RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 TAF11Q15544 211 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 SGCAQ16586 387 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 VMACQ2NL98 169 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZNF718Q3SXZ3 478 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 PABPC1L2AQ5JQF8 200 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 BEND6Q5SZJ8 279 aaPredicted RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 SPATA46Q5T0L3 261 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 NHLRC1Q6VVB1 395 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZNF771Q7L3S4 317 aaPredicted RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZER1Q7Z7L7 766 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 RBM45Q8IUH3 476 aaKnown RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZNF584Q8IVC4 421 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 WDFY1Q8IWB7 410 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 C1orf174Q8IYL3 243 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 PAQR4Q8N4S7 273 aaPredicted RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 OR10A6Q8NH74 314 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 FGFBP3Q8TAT2 258 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 NANPQ8TBE9 248 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ST7LQ8TDW4 575 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 TSPEARQ8WU66 669 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 TMEM239Q8WW34 195 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ASB10Q8WXI3 467 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 CCL17Q92583 94 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 NSMAFQ92636 917 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZNF75AQ96N20 296 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 ZNF347Q96SE7 839 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 WFDC6Q9BQY6 131 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 SIKE1Q9BRV8 207 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 POLR2J2Q9GZM3 115 aaKnown RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 RACGAP1Q9H0H5 632 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 PCDHAC1Q9H158 963 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 POLR2J3Q9H1A7 115 aaKnown RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 KAT8Q9H7Z6 458 aaKnown RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 NANOGQ9H9S0 305 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 SIAEQ9HAT2 523 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 SMURF2Q9HAU4 748 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 CYSLTR2Q9NS75 346 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 TAS2R5Q9NYW4 299 aa6.62□□□□□ -1.35
VPS50-204ENST00000438395 CGGBP1Q9UFW8 167 aaPredicted RBP6.62□□□□□ -1.35
VPS50-204ENST00000438395 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 A0A1W2PPL8 197 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 C12orf71A8MTZ7 269 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 HMGB1P1B2RPK0 211 aaPredicted RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 H3BSA7 217 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 WNT9BO14905 357 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 277.4 ms