RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FCRL1Q96LA6 429 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 NKX2-5P52952 324 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 NAA40Q86UY6 237 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SIAEQ9HAT2 523 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 NDRG3Q9UGV2 375 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 PCDHGA5Q9Y5G8 931 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 K7EQM0 130 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 PPICP45877 212 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 CA13Q8N1Q1 262 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF808Q8N4W9 903 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 MRGPRX4Q96LA9 322 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 ELF4Q99607 663 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-204ENST00000436978 WWTR1Q9GZV5 400 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 RAF1P04049 648 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SHEQ5VZ18 495 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 OVCH1Q7RTY7 1134 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 POFUT1Q9H488 388 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SH2D1BO14796 132 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 DOC2BQ14184 412 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 LAX1Q8IWV1 398 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
PTPN13-204ENST00000436978 A0A1W2PR48 441 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 LILRA5A6NI73 299 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 GRPP07492 148 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 RAD52P43351 418 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 RAB13P51153 203 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 NT5CQ8TCD5 201 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 C2CD4DB7Z1M9 353 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 CALCBP10092 127 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 ACSM1Q08AH1 577 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 LACC1Q8IV20 430 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 TECTBQ96PL2 329 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 GABARAPL1Q9H0R8 117 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 ARRDC5A6NEK1 342 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 TNFSF15O95150 251 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 RPS2P15880 293 aaKnown RBP14.52□□□□□ -0.08
PTPN13-204ENST00000436978 SMN1Q16637 294 aaKnown RBP14.52□□□□□ -0.08
PTPN13-204ENST00000436978 TMEM207Q6UWW9 146 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 SVBPQ8N300 66 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 PLEKHF2Q9H8W4 249 aa14.52□□□□□ -0.08
PTPN13-204ENST00000436978 TMEM200CA6NKL6 621 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 PMP2P02689 132 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 EDN3P14138 238 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 RTL8BQ17RB0 113 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 STEAP1BQ6NZ63 245 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 TFAP2EQ6VUC0 442 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 KANSL1Q7Z3B3 1105 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 BIN3Q9NQY0 253 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 PHF1O43189 567 aaPredicted RBP14.52□□□□□ -0.09
PTPN13-204ENST00000436978 CHRM2P08172 466 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 PSMB1P20618 241 aaKnown RBP14.52□□□□□ -0.09
PTPN13-204ENST00000436978 PRPH2P23942 346 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 MDGA2Q7Z553 956 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 GCNT2Q8N0V5 402 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 KIAA1456Q9P272 454 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 SBF2Q86WG5 1849 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 PMS2P2O95744 297 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 PMPCAQ10713 525 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 OXGR1Q96P68 337 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 TRIB1Q96RU8 372 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 C20orf85Q9H1P6 137 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 SLC17A4Q9Y2C5 497 aa14.52□□□□□ -0.09
PTPN13-204ENST00000436978 SHISA7A6NL88 538 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 LINC01387J3KSC0 135 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 HES1Q14469 280 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 SCCPDHQ8NBX0 429 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 S1PR5Q9H228 398 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 EXOSC3Q9NQT5 275 aaKnown RBP14.51□□□□□ -0.09
PTPN13-204ENST00000436978 HSD17B6O14756 317 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 TGM6O95932 706 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 FAM74A1Q5RGS3 127 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 COA3Q9Y2R0 106 aaPredicted RBP14.51□□□□□ -0.09
PTPN13-204ENST00000436978 PDCD11Q14690 1871 aaKnown RBP14.51□□□□□ -0.09
PTPN13-204ENST00000436978 PLXDC2Q6UX71 529 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 OR5D18Q8NGL1 313 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 RHOXF1Q8NHV9 184 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 NIPSNAP1Q9BPW8 284 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 POM121BA6NF01 834 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 HNF4GQ14541 408 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 AGBL4Q5VU57 503 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 ZNF573Q86YE8 665 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 LANCL2Q9NS86 450 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 TPPPO94811 219 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 ZGLP1P0C6A0 271 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 PRKACAP17612 351 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 ARL16Q0P5N6 197 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 EXD3Q8N9H8 876 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 MZB1Q8WU39 189 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 CORO2AQ92828 525 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.51□□□□□ -0.09
PTPN13-204ENST00000436978 ICOSLGO75144 302 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 CNIH1O95406 144 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 B3GLCTQ6Y288 498 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 RIMS4Q9H426 269 aaPredicted RBP14.51□□□□□ -0.09
PTPN13-204ENST00000436978 M0R082 166 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 TBXA2RP21731 343 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 GLIPR1L1Q6UWM5 242 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 CADM4Q8NFZ8 388 aa14.51□□□□□ -0.09
PTPN13-204ENST00000436978 TMEM129A0AVI4 362 aa14.5□□□□□ -0.09
PTPN13-204ENST00000436978 MKRN2OSH3BPM6 223 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms