RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IL7P13232 177 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 CD53P19397 219 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 GALP22466 123 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 PTGS2P35354 604 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 SUCLG1P53597 346 aaKnown RBP18.81■□□□□ 0.6
PTPRF-207ENST00000436724 CLRN1P58418 232 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 ACSM3Q53FZ2 586 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 SLC25A44Q96H78 314 aaPredicted RBP18.81■□□□□ 0.6
PTPRF-207ENST00000436724 TMEM14AQ9Y6G1 99 aa18.81■□□□□ 0.6
PTPRF-207ENST00000436724 SPTBN2O15020 2390 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 BLVRAP53004 296 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 CLDN17P56750 224 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 RPS11P62280 158 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPRF-207ENST00000436724 MFAP5Q13361 173 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 CCDC58Q4VC31 144 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 DNM1P34Q6PK57 102 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 IGF2-ASQ6U949 168 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 FAM220AQ7Z4H9 259 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 GALNTL5Q7Z4T8 443 aa18.8■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF703Q9H7S9 590 aaPredicted RBP18.8■□□□□ 0.6
PTPRF-207ENST00000436724 FAM166BA8MTA8 275 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 ZFPL1O95159 310 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 CSNK2A1P68400 391 aaPredicted RBP18.79■□□□□ 0.6
PTPRF-207ENST00000436724 CAMK2BQ13554 666 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 NR2C2APQ86WQ0 139 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 LINC00346Q8IVM7 164 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 NOXO1Q8NFA2 376 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF385AQ96PM9 386 aaKnown RBP18.79■□□□□ 0.6
PTPRF-207ENST00000436724 RBP7Q96R05 134 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 MNTQ99583 582 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 OR2B2Q9GZK3 357 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 KIAA1549Q9HCM3 1950 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 LOC102725191A0A1B0GVB3 256 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 EIF1BO60739 113 aaKnown RBP18.79■□□□□ 0.6
PTPRF-207ENST00000436724 IGHG1P01857 330 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 TACSTD2P09758 323 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 GAAP10253 952 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 MAGEB1P43366 347 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 GFRA1P56159 465 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 CLDN15P56746 228 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 EGR3Q06889 387 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 FAM131AQ6UXB0 335 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 KCTD20Q7Z5Y7 419 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 MS4A15Q8N5U1 240 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 OR6X1Q8NH79 312 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 KCNE4Q8WWG9 221 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 ABHD6Q9BV23 337 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 FRRS1LQ9P0K9 344 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 RASD1Q9Y272 281 aa18.79■□□□□ 0.6
PTPRF-207ENST00000436724 PHF3Q92576 2039 aaKnown RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 A0A1W2PQ09 198 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 OR5H15A6NDH6 313 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 GJE1A6NN92 205 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 PROB1E7EW31 1015 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 KHDRBS3O75525 346 aaKnown RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 MAGEA5P43359 124 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 EIF2B1Q14232 305 aaKnown RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 TRAM1Q15629 374 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 SLC18B1Q6NT16 456 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 XKRXQ6PP77 449 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF775Q96BV0 537 aaPredicted RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 OR14A2Q96R54 314 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 TTTY12Q9BZ98 90 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 FABP12A6NFH5 140 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 SMAD9O15198 467 aaKnown RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 SP1P08047 785 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 NKX2-5P52952 324 aaPredicted RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 THEM4Q5T1C6 240 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 HBMQ6B0K9 141 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 CORO6Q6QEF8 472 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 CREB3L2Q70SY1 520 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 MDS2Q8NDY4 140 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 RPS4Y2Q8TD47 263 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 DIRAS2Q96HU8 199 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 MAP6Q96JE9 813 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 OR8B4Q96RC9 309 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF552Q9H707 407 aaPredicted RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 ELOVL3Q9HB03 270 aa18.78■□□□□ 0.6
PTPRF-207ENST00000436724 MRPS18CQ9Y3D5 142 aaKnown RBP18.78■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF726A6NNF4 738 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 CENPBD1B2RD01 187 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 CXCL13O43927 109 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 ZNF823P16415 610 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 POU3F2P20265 443 aaPredicted RBP18.77■□□□□ 0.6
PTPRF-207ENST00000436724 CDAP32320 146 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 RRADP55042 308 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 CARD18P57730 90 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 RGP1Q92546 391 aaPredicted RBP18.77■□□□□ 0.6
PTPRF-207ENST00000436724 ORAI1Q96D31 301 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 TTYH2Q9BSA4 534 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 RNF32Q9H0A6 362 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 NPAP1Q9NZP6 1156 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 CSAG2Q9Y5P2 127 aa18.77■□□□□ 0.6
PTPRF-207ENST00000436724 PRRC2CQ9Y520 2896 aaKnown RBP18.77■□□□□ 0.6
PTPRF-207ENST00000436724 LINC00854A0A1B0GVQ3 168 aa18.76■□□□□ 0.59
PTPRF-207ENST00000436724 A0A1W2PPL8 197 aa18.76■□□□□ 0.59
PTPRF-207ENST00000436724 PHYHO14832 338 aa18.76■□□□□ 0.59
PTPRF-207ENST00000436724 CCNKO75909 580 aa18.76■□□□□ 0.59
PTPRF-207ENST00000436724 CSF3P09919 207 aa18.76■□□□□ 0.59
PTPRF-207ENST00000436724 NR4A2P43354 598 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms