RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 A0A0G2JPF8 293 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 CLPSL1A2RUU4 121 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TMEM247A6NEH6 219 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HNRNPCL2B2RXH8 293 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HNRNPCL3B7ZW38 293 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TRAPPC2LH3BP13 241 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TM9SF1O15321 606 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 MGRN1O60291 552 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HNRNPCL1O60812 293 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HPRP00739 348 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 NGFP01138 241 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HNRNPCL4P0DMR1 293 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HLA-DOBP13765 273 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 MAKP20794 623 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 OMGP23515 440 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 SLC6A9P48067 706 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 CSNK1A1P48729 337 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 RAG2P55895 527 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 BPIFB3P59826 476 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 PAX8Q06710 450 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 PUDPQ08623 228 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 HLXQ14774 488 aaPredicted RBP7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 PDCD1Q15116 288 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 MAPK11Q15759 364 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TBC1D28Q2M2D7 210 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 SLC36A2Q495M3 483 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 NRN1LQ496H8 165 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TMEM155Q4W5P6 130 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 SPANXN4Q5MJ08 99 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 FOXB2Q5VYV0 432 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 UNQ6126/PRO20091Q6UXV3 157 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 ZNF621Q6ZSS3 439 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 PXKQ7Z7A4 578 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 SERPINA11Q86U17 422 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 IFT20Q8IY31 132 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 C4orf33Q8N1A6 199 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 SLC22A24Q8N4F4 322 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TMEM86BQ8N661 226 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 KIR3DL3Q8N743 410 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 LSMEM1Q8N8F7 131 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 PANX1Q96RD7 426 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 EPYCQ99645 322 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 RBM4BQ9BQ04 359 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 SLC30A2Q9BRI3 323 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 EMC6Q9BV81 110 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TXLNGYQ9BZA5 131 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 PATZ1Q9HBE1 687 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 A4GALTQ9NPC4 353 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 ZDHHC8Q9ULC8 765 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 NPTNQ9Y639 398 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
NIF3L1-208ENST00000436412 RYR3Q15413 4870 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 IQCMA0A1B0GVH7 501 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 E9PBE3 544 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 GPANK1O95872 356 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 IGHV1-46P01743 117 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 IGHV2-70P01814 119 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 CD55P08174 381 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 PATE4P0C8F1 98 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 MMP15P51511 669 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 ERVS71-1P61550 626 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 SRSF4Q08170 494 aaKnown RBP7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 TAF9Q16594 264 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 ZNF718Q3SXZ3 478 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 ESCO2Q56NI9 601 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 ZMAT1Q5H9K5 638 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 FAM91A1Q658Y4 838 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 ASPHD2Q6ICH7 369 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 LRRN1Q6UXK5 716 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 LRRC28Q86X40 367 aaPredicted RBP7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 MIER2Q8N344 545 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 PARP8Q8N3A8 854 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 PAQR4Q8N4S7 273 aaPredicted RBP7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 Q8TCH9 128 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 SLC38A5Q8WUX1 472 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 TAF15Q92804 592 aaKnown RBP eCLIP7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 UPRTQ96BW1 309 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 APOPT1Q96IL0 206 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 TXNDC15Q96J42 360 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 SLC19A3Q9BZV2 496 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 RNF121Q9H920 327 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 NOX4Q9NPH5 578 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 TMEM38BQ9NVV0 291 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 MRPL39Q9NYK5 338 aaKnown RBP7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 GLTPQ9NZD2 209 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 OR5V1Q9UGF6 321 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 CHST2Q9Y4C5 530 aa7.05□□□□□ -1.28
NIF3L1-208ENST00000436412 COL7A1Q02388 2944 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 IGKV1D-42A0A075B6H8 117 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 A0A1B0GWA3 101 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 SRRM5B3KS81 715 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 H3BSA7 217 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 PLPP3O14495 311 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 HOXA3O43365 443 aaPredicted RBP7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 SPRY3O43610 288 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 ERLIN1O75477 346 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 C1QCP02747 245 aa7.04□□□□□ -1.28
NIF3L1-208ENST00000436412 BGLAPP02818 100 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms