RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CLCF1Q9UBD9 225 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 VANGL2Q9ULK5 521 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 HEBP2Q9Y5Z4 205 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 PPLO60437 1756 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 SYNMO15061 1565 aa4.19□□□□□ -1.74
USP54-206ENST00000433394 TMEM131LA2VDJ0 1609 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ROCK2O75116 1388 aaKnown RBP4.18□□□□□ -1.74
USP54-206ENST00000433394 TRPM1Q7Z4N2 1603 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 MADDQ8WXG6 1647 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 TRAV39A0A0B4J263 110 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 OR2AG2A6NM03 316 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 H7C0C1 242 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 HUS1O60921 280 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ERCC1P07992 297 aaPredicted RBP4.18□□□□□ -1.74
USP54-206ENST00000433394 CRISP2P16562 243 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 MAGEA1P43355 309 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 MRPL19P49406 292 aaKnown RBP4.18□□□□□ -1.74
USP54-206ENST00000433394 ACTA2P62736 377 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ACTG2P63267 376 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ACTC1P68032 377 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ACTA1P68133 377 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 PSG7Q13046 419 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 HSP90B2PQ58FF3 399 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 CCNJQ5T5M9 372 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 RFLNAQ6ZTI6 216 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 THOC6Q86W42 341 aaKnown RBP4.18□□□□□ -1.74
USP54-206ENST00000433394 IQCKQ8N0W5 287 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 DTX3LQ8TDB6 740 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ACER1Q8TDN7 264 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 TMEM54Q969K7 222 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 ELSPBP1Q96BH3 223 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 PANX1Q96RD7 426 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 CLSTN2Q9H4D0 955 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 FGF20Q9NP95 211 aaPredicted RBP4.18□□□□□ -1.74
USP54-206ENST00000433394 ADAMTSL3P82987 1691 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 SIGLEC1Q9BZZ2 1709 aa4.18□□□□□ -1.74
USP54-206ENST00000433394 C3P01024 1663 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 GLYATL1P3A0A0U1RQE8 302 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 LYRM9A8MSI8 78 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 PEX7O00628 323 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 CASC3O15234 703 aaKnown RBP4.17□□□□□ -1.74
USP54-206ENST00000433394 SMIM10L1P0DMW3 83 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 TDGF1P13385 188 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 TDGF1P3P51864 188 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 NDPQ00604 133 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 ZNF630Q2M218 657 aaPredicted RBP4.17□□□□□ -1.74
USP54-206ENST00000433394 CTRB2Q6GPI1 263 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 ASCL5Q7RTU5 278 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 BPIFCQ8NFQ6 507 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 SMIM10Q96HG1 83 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 DNAJC1Q96KC8 554 aaKnown RBP4.17□□□□□ -1.74
USP54-206ENST00000433394 BPIFA3Q9BQP9 254 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 RACGAP1Q9H0H5 632 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 CCNB1IP1Q9NPC3 277 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 CTPS2Q9NRF8 586 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 ZNF226Q9NYT6 803 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 SLC25A37Q9NYZ2 338 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 PIK3C2GO75747 1445 aa4.17□□□□□ -1.74
USP54-206ENST00000433394 ZNF142P52746 1687 aaPredicted RBP4.16□□□□□ -1.74
USP54-206ENST00000433394 CNTNAP1P78357 1384 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 DIP2AQ14689 1571 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 A0A1B0GUA9 196 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 PRSS37A4D1T9 235 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 ERVV-1B6SEH8 477 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 H0Y9J4 135 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 H0YC42 278 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 OR2F2O95006 317 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 ASGR1P07306 291 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 BTCP35070 178 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 NUDT1P36639 197 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 GNB2P62879 340 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 LIPEQ05469 1076 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 FZD2Q14332 565 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
USP54-206ENST00000433394 ALKBH6Q3KRA9 238 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 XKR4Q5GH76 650 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 TMEM53Q6P2H8 277 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 ABHD13Q7L211 337 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 C6orf120Q7Z4R8 191 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 CMC1Q7Z7K0 106 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 MMAAQ8IVH4 418 aaKnown RBP4.16□□□□□ -1.74
USP54-206ENST00000433394 C11orf53Q8IXP5 236 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 FBXL13Q8NEE6 735 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 C8orf44Q96CB5 159 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 OR2M2Q96R28 347 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 RPF2Q9H7B2 306 aaKnown RBP4.16□□□□□ -1.74
USP54-206ENST00000433394 CHRAC1Q9NRG0 131 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 DEC1Q9P2X7 70 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 PSME2Q9UL46 239 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 A2ML1A8K2U0 1454 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 SCAF11Q99590 1463 aaKnown RBP4.16□□□□□ -1.74
USP54-206ENST00000433394 WDR19Q8NEZ3 1342 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 SLIT1O75093 1534 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 NEXMIFQ5QGS0 1516 aa4.16□□□□□ -1.74
USP54-206ENST00000433394 UBR1Q8IWV7 1749 aa4.15□□□□□ -1.74
USP54-206ENST00000433394 MYO3AQ8NEV4 1616 aa4.15□□□□□ -1.74
USP54-206ENST00000433394 F6UB75 175 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 SPECC1L-ADORA2AF8WAN1 911 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 MRPS12O15235 138 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms