RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ST3GAL3Q11203 375 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 ENDOGQ14249 297 aaKnown RBP14.55□□□□□ -0.08
CPSF4-203ENST00000430038 THEM4Q5T1C6 240 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 OTPQ5XKR4 325 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 FOXL2NBQ6ZUU3 175 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 DPPA2Q7Z7J5 298 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 PCYOX1LQ8NBM8 494 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 OR13C2Q8NGS9 318 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 C11orf40Q8WZ69 217 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 MARS2Q96GW9 593 aaKnown RBP14.55□□□□□ -0.08
CPSF4-203ENST00000430038 SMURF2Q9HAU4 748 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 HIF1ANQ9NWT6 349 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 CAPN7Q9Y6W3 813 aa14.55□□□□□ -0.08
CPSF4-203ENST00000430038 SLC22A23A1A5C7 686 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 C5orf49A4QMS7 147 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 B4DSR2 109 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 IFNA14P01570 189 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 COX4I1P13073 169 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 LSP1P33241 339 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 APLNRP35414 380 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 CRYBB2P43320 205 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 MVKQ03426 396 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 HSF2Q03933 536 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 PLP2Q04941 152 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 MAPRE2Q15555 327 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 TSTQ16762 297 aaKnown RBP14.54□□□□□ -0.08
CPSF4-203ENST00000430038 ZNF774Q6NX45 483 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 RFPL4BQ6ZWI9 263 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 OFCC1Q8IZS5 231 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 SLC25A40Q8TBP6 338 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 IPCEF1Q8WWN9 437 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-203ENST00000430038 BCL2L14Q9BZR8 327 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 OR2H1Q9GZK4 316 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 C1orf198Q9H425 327 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 POFUT1Q9H488 388 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 CCDC134Q9H6E4 229 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 ADAM18Q9Y3Q7 739 aa14.54□□□□□ -0.08
CPSF4-203ENST00000430038 CXCR6O00574 342 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 DEAF1O75398 565 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-203ENST00000430038 VENTXO95231 258 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 PTHP01270 115 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 NCK1P16333 377 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 ITGA2P17301 1181 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 DBPQ10586 325 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-203ENST00000430038 USP51Q70EK9 711 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 CBLL1Q75N03 491 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 OR1J2Q8NGS2 313 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 RP9Q8TA86 221 aaKnown RBP14.53□□□□□ -0.08
CPSF4-203ENST00000430038 TMEM186Q96B77 213 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 OR2J1Q9GZK6 312 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 CCNB1IP1Q9NPC3 277 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 DCAF16Q9NXF7 216 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 NKIRAS2Q9NYR9 191 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 KLHL21Q9UJP4 597 aa14.53□□□□□ -0.08
CPSF4-203ENST00000430038 ZSCAN5BA6NJL1 495 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 ENTPD5O75356 428 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 ZNF682O95780 498 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 IGHV1-46P01743 117 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 MSMBP08118 114 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 CST2P09228 141 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 GPR4P46093 362 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 GSK3BP49841 420 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 SLC7A2P52569 658 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 TRAM2Q15035 370 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 TMEM154Q6P9G4 183 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 KLF14Q8TD94 323 aaPredicted RBP14.52□□□□□ -0.09
CPSF4-203ENST00000430038 HSH2DQ96JZ2 352 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 ALG12Q9BV10 488 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 FNDC11Q9BVV2 318 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 EMC7Q9NPA0 242 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 G6PC2Q9NQR9 355 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 SLCO1C1Q9NYB5 712 aa14.52□□□□□ -0.09
CPSF4-203ENST00000430038 IGHV1-69-2A0A0G2JMI3 117 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 EFCAB9A8MZ26 197 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 SPRY3O43610 288 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 SERPINA1P01009 418 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 SRP14P37108 136 aaKnown RBP14.51□□□□□ -0.09
CPSF4-203ENST00000430038 ZNF81P51508 661 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 FXYD6P3P58550 94 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 TAF11Q15544 211 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 MESTQ5EB52 335 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 THSD4Q6ZMP0 1018 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 FAM122BQ7Z309 247 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 HDDC2Q7Z4H3 204 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 OAFQ86UD1 273 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 GLCCI1Q86VQ1 547 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 SLC7A13Q8TCU3 470 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 Q96M85 177 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 LRRC37BQ96QE4 947 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 RBP7Q96R05 134 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 LRMDAQ9H2I8 198 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 METTL17Q9H7H0 456 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-203ENST00000430038 ZNF665Q9H7R5 613 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 WIPI2Q9Y4P8 454 aa14.51□□□□□ -0.09
CPSF4-203ENST00000430038 A0A1W2PPL8 197 aa14.5□□□□□ -0.09
CPSF4-203ENST00000430038 SLC22A2O15244 555 aa14.5□□□□□ -0.09
CPSF4-203ENST00000430038 PLPP2O43688 288 aa14.5□□□□□ -0.09
CPSF4-203ENST00000430038 ICMTO60725 284 aa14.5□□□□□ -0.09
CPSF4-203ENST00000430038 PTP4A3O75365 173 aa14.5□□□□□ -0.09
CPSF4-203ENST00000430038 UBOX5O94941 541 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms