RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KCNJ16Q9NPI9 418 aa8.06□□□□□ -1.12
CDC42BPA-206ENST00000429440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC23A2Q9UGH3 650 aa8.06□□□□□ -1.12
CDC42BPA-206ENST00000429440 VAX2Q9UIW0 290 aa8.06□□□□□ -1.12
CDC42BPA-206ENST00000429440 FARSAQ9Y285 508 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-206ENST00000429440 TGFB1P01137 390 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 CXCL1P09341 107 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 CALCBP10092 127 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 NR2F1P10589 423 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SELEP16581 610 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 CTGFP29279 349 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 GDF5P43026 501 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 RPL29P47914 159 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 NOVA1P51513 510 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SPOCK1Q08629 439 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 DUSP8Q13202 625 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 DHRS2Q13268 280 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 IHHQ14623 411 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 GUK1Q16774 197 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 PWWP2BQ6NUJ5 590 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 REEP3Q6NUK4 255 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 C16orf59Q7L2K0 433 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 C9orf40Q8IXQ3 194 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR14K1Q8NGZ2 314 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 RGP1Q92546 391 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 MIB2Q96AX9 1013 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SEC22AQ96IW7 307 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 LINC00597Q9H2U6 94 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 NRIP3Q9NQ35 241 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 LUZP4Q9P127 313 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 KIAA1671Q9BY89 1806 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 KCNE1BA0A087WTH5 132 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 CBY3A6NI87 242 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 IFITM5A6NNB3 132 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 NPIPA2E9PIF3 369 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 STK16O75716 305 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 GLSO94925 669 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR8U9P0C7N5 309 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ELFN1P0C7U0 828 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 FCARP24071 287 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 AQP2P41181 271 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 REEP5Q00765 189 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ENPP2Q13822 863 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 PRAMEF17Q5VTA0 474 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZNF585AQ6P3V2 769 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 FCRLAQ7L513 359 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 NUP54Q7Z3B4 507 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 BIVMQ86UB2 503 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ADIPOR2Q86V24 386 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 FAM129CQ86XR2 697 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SIRT6Q8N6T7 355 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR2D3Q8NGH3 330 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SYNPRQ8TBG9 265 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 SFXN5Q8TD22 340 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 KCNE4Q8WWG9 221 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 CXorf40BQ96DE9 158 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 GPA33Q99795 319 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 FOXJ2Q9P0K8 574 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 USP36Q9P275 1121 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 AK6Q9Y3D8 172 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 Q9Y3F1 56 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ETV7Q9Y603 341 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 HS3ST3B1Q9Y662 390 aa8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZNF106Q9H2Y7 1883 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-206ENST00000429440 DHRS7CA6NNS2 312 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CYR61O00622 381 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 TAAR5O14804 337 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CCL25O15444 150 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 LRP3O75074 770 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 PIAS2O75928 621 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 TSPAN15O95858 294 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CTXN2P0C2S0 81 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 CDK2P24941 298 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACTBP60709 375 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACTA2P62736 377 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 VAMP2P63027 116 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACTG1P63261 375 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACTG2P63267 376 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACTC1P68032 377 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ACTA1P68133 377 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 MRPS6P82932 125 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZNF235Q14590 738 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 MARC1Q5VT66 337 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 C17orf99Q6UX52 265 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC35E3Q7Z769 313 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 GABRG1Q8N1C3 465 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 MORN4Q8NDC4 146 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 GPR32P1Q8NGA4 272 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR2AP1Q8NGE2 309 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 GHSRQ92847 366 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 ZBTB8AQ96BR9 441 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 DERL3Q96Q80 235 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 SLC35A5Q9BS91 424 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 OR51I1Q9H343 314 aa8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 NOP16Q9Y3C1 178 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 NYNRINQ9P2P1 1898 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-206ENST00000429440 A0A0G2JN53 185 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms