RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PTTG3PQ9NZH4 202 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
CDH3-202ENST00000429102 GPR89AB7ZAQ6 455 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 H7C417 338 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 GPR31O00270 319 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 GPR89BP0CG08 455 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 GLULP15104 373 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 EPHA4P54764 986 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 PRPS1P60891 318 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 BAMBIQ13145 260 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 LRRTM1Q86UE6 522 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 SLC38A3Q99624 504 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 GSKIPQ9P0R6 139 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 MTFP1Q9UDX5 166 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 COA3Q9Y2R0 106 aaPredicted RBP11.28□□□□□ -0.6
CDH3-202ENST00000429102 A0A087WV62 115 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 A0A1W2PQF6 199 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 OR5H14A6NHG9 310 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 TRIM77I1YAP6 450 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 XRCC3O43542 346 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 ICOSLGO75144 302 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 S1PR1P21453 382 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 HNRNPA2B1P22626 353 aaKnown RBP11.27□□□□□ -0.6
CDH3-202ENST00000429102 KIR2DL1P43626 348 aaPredicted RBP11.27□□□□□ -0.6
CDH3-202ENST00000429102 KIR3DL2P43630 455 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 RAB38P57729 211 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 RSPO4Q2I0M5 234 aaPredicted RBP11.27□□□□□ -0.6
CDH3-202ENST00000429102 VWA2Q5GFL6 755 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 OR5D18Q8NGL1 313 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 OR1J4Q8NGS1 313 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 OR13C3Q8NGS6 347 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 OR1S1Q8NH92 325 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 SLC7A5P2Q9GIP4 190 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 MMP25Q9NPA2 562 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 PCDHB16Q9NRJ7 776 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 MSRAQ9UJ68 235 aa11.27□□□□□ -0.6
CDH3-202ENST00000429102 ABCA7Q8IZY2 2146 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.61
CDH3-202ENST00000429102 D6RAR5 112 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 IL11P20809 199 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 ZP3P21754 424 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 MAPK3P27361 379 aaPredicted RBP11.27□□□□□ -0.61
CDH3-202ENST00000429102 SDHAP31040 664 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 DLSTP36957 453 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 EGR4Q05215 589 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 NR0B2Q15466 257 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 HAGHLQ6PII5 290 aaPredicted RBP11.27□□□□□ -0.61
CDH3-202ENST00000429102 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.27□□□□□ -0.61
CDH3-202ENST00000429102 PXT1Q8NFP0 134 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 BPIFCQ8NFQ6 507 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 MARC2Q969Z3 335 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 G6PC3Q9BUM1 346 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 SEC61A2Q9H9S3 476 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 PLCL2Q9UPR0 1127 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 ATG12O94817 140 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 UTS2O95399 124 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 AK1P00568 194 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 AKR1C3P42330 323 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 ARFIP1P53367 373 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 UBE2IP63279 158 aaKnown RBP11.27□□□□□ -0.61
CDH3-202ENST00000429102 ACKR1Q16570 336 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 HLA-DQA1Q5Y7H0 255 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 COX15Q7KZN9 410 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 BVESQ8NE79 360 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 PPP1R1CQ8WVI7 109 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 MED29Q9NX70 200 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 CKLFQ9UBR5 152 aa11.27□□□□□ -0.61
CDH3-202ENST00000429102 MRPS18BQ9Y676 258 aaKnown RBP11.27□□□□□ -0.61
CDH3-202ENST00000429102 OR2M5A3KFT3 312 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 PRAMEF2O60811 474 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 PMP2P02689 132 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 GLI4P10075 376 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 CTLA4P16410 223 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 IL32P24001 234 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 IL12BP29460 328 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 SLC9A3R2Q15599 337 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 CARD17Q5XLA6 110 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 UNQ9370/PRO34162Q6UXP9 181 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 ZNF101Q8IZC7 436 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 ZNF417Q8TAU3 575 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 PNPLA2Q96AD5 504 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 EPHA6Q9UF33 1036 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 POLR1DQ9Y2S0 133 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 TMED7Q9Y3B3 224 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 H7C2Y5 167 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 ZNF264O43296 627 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 HTR3BO95264 441 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 TNFP01375 233 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 THEGLP0DJG4 465 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 GAAP10253 952 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms