RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ZFAND2BQ8WV99 257 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 TMEM230Q96A57 120 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 SLCO5A1Q9H2Y9 848 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 ETV7Q9Y603 341 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 UBR3Q6ZT12 1888 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 TNFRSF10CO14798 259 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 ELK1P19419 428 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 CNR1P21554 472 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 SRP9P49458 86 aaKnown RBP8.21□□□□□ -1.1
CTNND1-208ENST00000428599 TPMTP51580 245 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 ALKBH1Q13686 389 aaKnown RBP8.21□□□□□ -1.1
CTNND1-208ENST00000428599 ELAVL1Q15717 326 aaKnown RBP8.21□□□□□ -1.1
CTNND1-208ENST00000428599 OR8G2PQ6IF36 304 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 LYPD8Q6UX82 237 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 MDGA2Q7Z553 956 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 ADGRE4PQ86SQ3 457 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 FBXL14Q8N1E6 418 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 GIMAP1Q8WWP7 306 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 TMEM106AQ96A25 262 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 CSF3RQ99062 836 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 KLK4Q9Y5K2 254 aa8.21□□□□□ -1.1
CTNND1-208ENST00000428599 BHLHE40O14503 412 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 SLC35D3Q5M8T2 416 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 GLIPR1L1Q6UWM5 242 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 DCXRQ7Z4W1 244 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 SEMA4CQ9C0C4 833 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 AMBRA1Q9C0C7 1298 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 EXO1Q9UQ84 846 aaKnown RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 TCRBV5S1A1TA0A578 114 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 H0YIV9 168 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 PMP2P02689 132 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 CR2P20023 1033 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 CD1CP29017 333 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 GABRA5P31644 462 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 ZNF91Q05481 1191 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 MRPL58Q14197 206 aaKnown RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 HENMT1Q5T8I9 393 aaKnown RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 C17orf107Q6ZR85 190 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 KLHDC8BQ8IXV7 354 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 OR10AD1Q8NGE0 317 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 FBXO27Q8NI29 283 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 HES4Q9HCC6 221 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 RNF24Q9Y225 148 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 A0A1B0GWA3 101 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 J3KTA2 159 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 NRG2O14511 850 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 CYTIPO60759 359 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 AKR7A3O95154 331 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 PPP3CBP16298 524 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 EIF2DP41214 584 aaKnown RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 NOVA1P51513 510 aaKnown RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 TFAP2EQ6VUC0 442 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 GABRG1Q8N1C3 465 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 DEFB108BQ8NET1 73 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 LKAAEAR1Q8TD35 194 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 REEP6Q96HR9 211 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 TECTBQ96PL2 329 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 FAM173AQ9BQD7 235 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 MED20Q9H944 212 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 GALNT9Q9HCQ5 603 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 SLC2A8Q9NY64 477 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 RREB1Q92766 1687 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 A6NIN4 97 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 PIWIL3Q7Z3Z3 882 aaKnown RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 OR5M1Q8NGP8 315 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 LYRM4Q9HD34 91 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 LINC01565O15544 149 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 C21orf33P30042 268 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 GIPRP48546 466 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 RBP2P50120 134 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 C18orf63Q68DL7 685 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 MFSD12Q6NUT3 480 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 KDM8Q8N371 416 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 OR6M1Q8NGM8 313 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 MAFAQ8NHW3 353 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-208ENST00000428599 ATOH8Q96SQ7 321 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 COMMD5Q9GZQ3 224 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 SLCO1B1Q9Y6L6 691 aa8.2□□□□□ -1.1
CTNND1-208ENST00000428599 LAMB2P55268 1798 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 TRBV4-1A0A0J9YWV2 114 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 PPP6CO00743 305 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 TACR1P25103 407 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 POU4F3Q15319 338 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 ADIRFQ15847 76 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 PHLDA2Q53GA4 152 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 NXNL2Q5VZ03 156 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 PRSS35Q8N3Z0 413 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 ELF4Q99607 663 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-208ENST00000428599 NIPSNAP3BQ9BS92 247 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 SOX7Q9BT81 388 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 MS4A8Q9BY19 250 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 ARRDC1-AS1Q9H2J1 176 aa8.19□□□□□ -1.1
CTNND1-208ENST00000428599 SSC5DA1L4H1 1573 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms