RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
PRPF39-202ENST00000424478 GLB1L2Q8IW92 636 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF416Q9BWM5 594 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF587BE7ETH6 402 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 E9PLN8 166 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 DOK2O60496 412 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 ZG16O60844 167 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 HLA-HP01893 362 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 SBK2P0C263 348 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 CTSSP25774 331 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 GRNP28799 593 aaKnown RBP11.8□□□□□ -0.52
PRPF39-202ENST00000424478 CRABP1P29762 137 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 PTGER4P35408 488 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 TEKQ02763 1124 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 GLO1Q04760 184 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 STK11Q15831 433 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 OR2G6Q5TZ20 316 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 FAM205BPQ63HN1 556 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF813Q6ZN06 617 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 GID4Q8IVV7 300 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 SLC7A6Q92536 515 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 RND1Q92730 232 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 NABP1Q96AH0 204 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 Q96MT0 163 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 FOXB1Q99853 325 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 POLR1DQ9Y2S0 133 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 SLC22A31A6NKX4 558 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 C12orf71A8MTZ7 269 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 RER1O15258 196 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 ETV1P50549 477 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 CXCR4P61073 352 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 SLC35A2P78381 396 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 MEDAGQ5VYS4 303 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 C22orf34Q6ZV56 151 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 TIGD4Q8IY51 512 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 THEM6Q8WUY1 208 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 RFKQ969G6 155 aa11.8□□□□□ -0.52
PRPF39-202ENST00000424478 GCN1Q92616 2671 aaKnown RBP11.8□□□□□ -0.52
PRPF39-202ENST00000424478 PNMA8CA0A1B0GUJ8 204 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 A0A1W2PQL4 384 aaPredicted RBP11.79□□□□□ -0.52
PRPF39-202ENST00000424478 HSF2Q03933 536 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 SKA3Q8IX90 412 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 FBXO17Q96EF6 278 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 NOX3Q9HBY0 568 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
PRPF39-202ENST00000424478 SLC15A1P46059 708 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 CFAP77Q6ZQR2 320 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 CNN2Q99439 309 aaKnown RBP11.79□□□□□ -0.52
PRPF39-202ENST00000424478 RACGAP1Q9H0H5 632 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 NELFAQ9H3P2 528 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 ISG20L2Q9H9L3 353 aaKnown RBP11.79□□□□□ -0.52
PRPF39-202ENST00000424478 POLE4Q9NR33 117 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 TMEM38BQ9NVV0 291 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 SCN3BQ9NY72 215 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 MALT1Q9UDY8 824 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 LHFPL6Q9Y693 200 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 H3BSH0 61 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 AGFG2O95081 481 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 RNF224P0DH78 156 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 ANOS1P23352 680 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 SLC25A30Q5SVS4 291 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 HDDC2Q7Z4H3 204 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 PLSCR4Q9NRQ2 329 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 GLRX2Q9NS18 164 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 ERRFI1Q9UJM3 462 aaPredicted RBP11.79□□□□□ -0.52
PRPF39-202ENST00000424478 N6AMT1Q9Y5N5 214 aa11.79□□□□□ -0.52
PRPF39-202ENST00000424478 CIB4A0PJX0 185 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 CCL2P13500 99 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 SF3B4Q15427 424 aaKnown RBP eCLIP11.78□□□□□ -0.524e-6■■■□□ 16.1
PRPF39-202ENST00000424478 DCXRQ7Z4W1 244 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 SLC35F2Q8IXU6 374 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 GABRG1Q8N1C3 465 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 POMGNT2Q8NAT1 580 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 AKR7LQ8NHP1 331 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 TACC2O95359 2948 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF99A8MXY4 864 aaPredicted RBP11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF84P51523 738 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ENDOGQ14249 297 aaKnown RBP11.78□□□□□ -0.52
PRPF39-202ENST00000424478 NEDD8Q15843 81 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 TP53I3Q53FA7 332 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 C10orf128Q5T292 105 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 DNM1P34Q6PK57 102 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 LRRN1Q6UXK5 716 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 SLC22A24Q8N4F4 322 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ZFP41Q8N8Y5 198 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 MAP6Q96JE9 813 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 CDADC1Q9BWV3 514 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF224Q9NZL3 707 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 WARS2Q9UGM6 360 aaKnown RBP11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ICE1Q9Y2F5 2266 aa11.78□□□□□ -0.52
PRPF39-202ENST00000424478 ANKHD1Q8IWZ3 2542 aaKnown RBP11.78□□□□□ -0.52
PRPF39-202ENST00000424478 PTHP01270 115 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 CD79AP11912 226 aa11.77□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF823P16415 610 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms