RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NANSQ9NR45 359 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 C20orf141Q9NUB4 165 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SLC13A4Q9UKG4 626 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ANGPT4Q9Y264 503 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 PRORSD1PA6NEY8 169 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 M0QX08 132 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 PIP5K1CO60331 668 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 GPANK1O95872 356 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 APLNRP35414 380 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 IDH3AP50213 366 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 PSG4Q00888 419 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 TEKQ02763 1124 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 FOXL1Q12952 345 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF154Q13106 437 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 SWT1Q5T5J6 900 aaKnown RBP10.85□□□□□ -0.67
LINC00339-203ENST00000420503 TTC33Q6PID6 262 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-203ENST00000420503 NANOGNBQ7Z5D8 188 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 NKAIN4Q8IVV8 208 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF607Q96SK3 696 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 WNT5BQ9H1J7 359 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 EGFL7Q9UHF1 273 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 GPR160Q9UJ42 338 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF229Q9UJW7 825 aa10.85□□□□□ -0.67
LINC00339-203ENST00000420503 FMO6PO60774 539 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF205O95201 554 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 SCG5P05408 212 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 THRBP10828 461 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 ACADSP16219 412 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 FPR2P25090 351 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 PPP1CBP62140 327 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 PLP2Q04941 152 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 BAMBIQ13145 260 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-203ENST00000420503 ZMYND11Q15326 602 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 SGCAQ16586 387 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 AGKQ53H12 422 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 RUNDC3AQ59EK9 446 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 ARMC4Q5T2S8 1044 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF774Q6NX45 483 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 Q6ZR03 302 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 TEX29Q8N6K0 151 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 OR1J2Q8NGS2 313 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 TMEM255BQ8WV15 326 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 NTN4Q9HB63 628 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 NUP50Q9UKX7 468 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 NPTNQ9Y639 398 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 GMEB1Q9Y692 573 aa10.84□□□□□ -0.67
LINC00339-203ENST00000420503 DOCK11Q5JSL3 2073 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 IGHV3-64DA0A0J9YX35 117 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 TRAPPC13A5PLN9 417 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 MCIDASD6RGH6 385 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 SERPINB7O75635 380 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 IGHMP01871 453 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 ZNF12P17014 697 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 LAP3P28838 519 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 GCH1P30793 250 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 CD80P33681 288 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 MRPL19P49406 292 aaKnown RBP10.83□□□□□ -0.68
LINC00339-203ENST00000420503 ZNF84P51523 738 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 ZNF133P52736 654 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-203ENST00000420503 STX1BP61266 288 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 LAPTM4AQ15012 233 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 ZNF718Q3SXZ3 478 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 MMEL1Q495T6 779 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 C10orf128Q5T292 105 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
LINC00339-203ENST00000420503 IGFN1Q86VF2 1251 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 ST7LQ8TDW4 575 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 SIGLEC11Q96RL6 698 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 OR2H1Q9GZK4 316 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 C1orf198Q9H425 327 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 CCNB1IP1Q9NPC3 277 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 MED4Q9NPJ6 270 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 INTS9Q9NV88 658 aaKnown RBP10.83□□□□□ -0.68
LINC00339-203ENST00000420503 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 KLHL21Q9UJP4 597 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
LINC00339-203ENST00000420503 PLSCR5A0PG75 271 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 POLR3GO15318 223 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 FOXH1O75593 365 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 OR7A10O76100 309 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 RNASE1P07998 156 aaKnown RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 GATA3P23771 443 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 SLC6A9P48067 706 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 GDI2P50395 445 aaKnown RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 ATP4BP51164 291 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 MRPS34P82930 218 aaKnown RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 TNFAIP6P98066 277 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 HOXA4Q00056 320 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 PSG7Q13046 419 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 CYP51A1Q16850 503 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 SLC25A47Q6Q0C1 308 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 RBMS3Q6XE24 437 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms