RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CMAHPQ9Y471 501 aa18.65■□□□□ 0.58
GPC1-202ENST00000420138 FAM166BA8MTA8 275 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 GDI2P50395 445 aaKnown RBP18.64■□□□□ 0.57
GPC1-202ENST00000420138 CCL11P51671 97 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 RPS11P62280 158 aaKnown RBP eCLIP18.64■□□□□ 0.57
GPC1-202ENST00000420138 ADAM8P78325 824 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 LIPNQ5VXI9 398 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 HBMQ6B0K9 141 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.64■□□□□ 0.57
GPC1-202ENST00000420138 UBQLNLQ8IYU4 475 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 OR2V1Q8NHB1 315 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 THEM6Q8WUY1 208 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 ZNF385AQ96PM9 386 aaKnown RBP18.64■□□□□ 0.57
GPC1-202ENST00000420138 RBP7Q96R05 134 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 SLCO1C1Q9NYB5 712 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 CSAG2Q9Y5P2 127 aa18.64■□□□□ 0.57
GPC1-202ENST00000420138 POU3F2P20265 443 aaPredicted RBP18.63■□□□□ 0.57
GPC1-202ENST00000420138 CLDN17P56750 224 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CARD18P57730 90 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 TEX30Q5JUR7 227 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 SLC25A47Q6Q0C1 308 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 IGFL2Q6UWQ7 119 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 ZFP62Q8NB50 900 aaPredicted RBP18.63■□□□□ 0.57
GPC1-202ENST00000420138 OR9K2Q8NGE7 335 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 OR13C5Q8NGS8 318 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 OR10D3Q8NH80 312 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 OR8B4Q96RC9 309 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CCDC32Q9BV29 185 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 SP140LQ9H930 580 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 KLHL9Q9P2J3 617 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 LINC01387J3KSC0 135 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 PHYHO14832 338 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CXCL13O43927 109 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 WNT11O96014 354 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 SPARCP09486 303 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CD46P15529 392 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 EDNRAP25101 427 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 RANBP1P43487 201 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CLRN1P58418 232 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 ARG2P78540 354 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 TRAM1Q15629 374 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 DEFB109BQ30KR1 87 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CARD17Q5XLA6 110 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 LRFN4Q6PJG9 635 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 TRILQ7L0X0 811 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 HDDC2Q7Z4H3 204 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 SNIP1Q8TAD8 396 aaKnown RBP18.63■□□□□ 0.57
GPC1-202ENST00000420138 AP3S1Q92572 193 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 NSMAFQ92636 917 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 MAP6Q96JE9 813 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 POLE4Q9NR33 117 aa18.63■□□□□ 0.57
GPC1-202ENST00000420138 CNTRLQ7Z7A1 2325 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 A0A087WV48 116 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 TRBV2A0A0J9YWF9 115 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 KLRC4-KLRK1H3BQV0 150 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 CASKO14936 926 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 HRGP04196 525 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 KRT8P05787 483 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 HNRNPCP07910 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
GPC1-202ENST00000420138 TACSTD2P09758 323 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 LHX2P50458 406 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 TNFSF10P50591 281 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 ROM1Q03395 351 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 SLC18B1Q6NT16 456 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 GLB1L2Q8IW92 636 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 MS4A15Q8N5U1 240 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 NEIL3Q8TAT5 605 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 MCHR2Q969V1 340 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 OR2M2Q96R28 347 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 PDCD1LG2Q9BQ51 273 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 ABHD6Q9BV23 337 aa18.62■□□□□ 0.57
GPC1-202ENST00000420138 ZNF432O94892 652 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 ZNF766Q5HY98 468 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 FAM27D1Q5T7N8 215 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.61■□□□□ 0.57
GPC1-202ENST00000420138 LAX1Q8IWV1 398 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 TMEM123Q8N131 208 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 YIPF7Q8N8F6 280 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 POC5Q8NA72 575 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 ASB17Q8WXJ9 295 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 C11orf40Q8WZ69 217 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 SDHCQ99643 169 aaPredicted RBP18.61■□□□□ 0.57
GPC1-202ENST00000420138 SF3B5Q9BWJ5 86 aaKnown RBP18.61■□□□□ 0.57
GPC1-202ENST00000420138 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.61■□□□□ 0.573e-7■■■■□ 24.7
GPC1-202ENST00000420138 SLC6A15Q9H2J7 730 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 IKZF2Q9UKS7 526 aa18.61■□□□□ 0.57
GPC1-202ENST00000420138 ZNF726A6NNF4 738 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ZNF716A6NP11 495 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 RPP14O95059 124 aaKnown RBP18.6■□□□□ 0.57
GPC1-202ENST00000420138 EIF1AXP47813 144 aaKnown RBP18.6■□□□□ 0.57
GPC1-202ENST00000420138 CLDN18P56856 261 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 PLGLB1Q02325 96 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ACSM3Q53FZ2 586 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ABLIM2Q6H8Q1 611 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 LRRN1Q6UXK5 716 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 FAM220AQ7Z4H9 259 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ZNF454Q8N9F8 522 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 ST7LQ8TDW4 575 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 FRRS1LQ9P0K9 344 aa18.6■□□□□ 0.57
GPC1-202ENST00000420138 FREM3P0C091 2139 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms