RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 IGF2P01344 180 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 CSF1P09603 554 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 M6PRP20645 277 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 FASLGP48023 281 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 CCR5P51681 352 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 DLX5P56178 289 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 DHODHQ02127 395 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 C1orf189Q5VU69 101 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 C11orf88Q6PI97 169 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 TMUB2Q71RG4 321 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 WDFY1Q8IWB7 410 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 OR2AK2Q8NG84 335 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 OR6N1Q8NGY5 312 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 ADAMTS18Q8TE60 1221 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 ASB5Q8WWX0 329 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 PNPLA2Q96AD5 504 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 CCNL2Q96S94 520 aaPredicted RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 ABHD6Q9BV23 337 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 NUP50Q9UKX7 468 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 TRAV36DV7A0A075B6V5 113 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 LOC100289279A0A1B0GTE1 492 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 H0YIG0 161 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF432O94892 652 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 CSN2P05814 226 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 MYF5P13349 255 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 S100A11P31949 105 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 RPL27P61353 136 aaKnown RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 SPOCK1Q08629 439 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 EIF2B1Q14232 305 aaKnown RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 EBPQ15125 230 aaKnown RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 STEAP1BQ6NZ63 245 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 C15orf40Q8WUR7 153 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 TINAGL1Q9GZM7 467 aaPredicted RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 POFUT1Q9H488 388 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 SDHAF2Q9NX18 166 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF230Q9UIE0 474 aaPredicted RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 COA3Q9Y2R0 106 aaPredicted RBP13.03□□□□□ -0.32
HDAC9-208ENST00000417496 UNC13CQ8NB66 2214 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 TEX51A0A1B0GUA7 166 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 SLC17A2O00624 439 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 NMBP08949 121 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 AKAIN1P0CW23 69 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 SORDQ00796 357 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 FMODQ06828 376 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 MOGAT2Q3SYC2 334 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.32
HDAC9-208ENST00000417496 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 C17orf107Q6ZR85 190 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 MAMDC2Q7Z304 686 aaPredicted RBP13.02□□□□□ -0.32
HDAC9-208ENST00000417496 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 LINC00346Q8IVM7 164 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 GALNT16Q8N428 558 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 NKD1Q969G9 470 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 C8orf44Q96CB5 159 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 REG4Q9BYZ8 158 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 EMC9Q9Y3B6 208 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 LRP12Q9Y561 859 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 KCNMB2Q9Y691 235 aa13.02□□□□□ -0.32
HDAC9-208ENST00000417496 CABIN1Q9Y6J0 2220 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 IGLV1-36A0A0B4J1U3 117 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 IGHV3-20A0A0C4DH32 117 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 LOC101059948A0A1B0GTJ6 334 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 TCRBV16S1A1N1A0A5B0 115 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 F5H5P2 479 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 TMEM127O75204 238 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 LPLP06858 475 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 LIPCP11150 499 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 ABCD3P28288 659 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 CSF2RBP32927 897 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 TUSC1Q2TAM9 212 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 TEX30Q5JUR7 227 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 RNF128Q8TEB7 428 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 SEH1LQ96EE3 360 aa13.02□□□□□ -0.33
HDAC9-208ENST00000417496 ZNF587Q96SQ5 575 aaPredicted RBP13.02□□□□□ -0.33
HDAC9-208ENST00000417496 FARSAQ9Y285 508 aaKnown RBP13.02□□□□□ -0.33
HDAC9-208ENST00000417496 LOC100509620A0A075B734 347 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 TMED7-TICAM2A0A0A6YYA0 188 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 hCG_1807616A0A1W2PRN6 198 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 SLC22A23A1A5C7 686 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 C2CD4DB7Z1M9 353 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-208ENST00000417496 ALOX12BO75342 701 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 GP1BBP13224 206 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 GABRG1Q8N1C3 465 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 ZNF519Q8TB69 540 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 THAP3Q8WTV1 239 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-208ENST00000417496 SLC25A28Q96A46 364 aa13.01□□□□□ -0.33
HDAC9-208ENST00000417496 SLC25A44Q96H78 314 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-208ENST00000417496 MS4A7Q9GZW8 240 aaPredicted RBP13.01□□□□□ -0.33
HDAC9-208ENST00000417496 APMAPQ9HDC9 416 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms