RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PRRG3Q9BZD7 231 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 NANSQ9NR45 359 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 EXOSC1Q9Y3B2 195 aaKnown RBP12.94□□□□□ -0.34
SGCE-202ENST00000415788 HSPB11Q9Y547 144 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 FREM3P0C091 2139 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 TRGV8A0A0C4DH27 118 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 TRDV1A0A1B0GX56 115 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 SLC22A20A6NK97 555 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 LEUTXA8MZ59 168 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 CH25HO95992 272 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 IFI30P13284 250 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 PTNP21246 168 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 APEX1P27695 318 aaKnown RBP12.93□□□□□ -0.34
SGCE-202ENST00000415788 EVX1P49640 407 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 H3F3AP84243 136 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 RAB40BQ12829 278 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 MRPL49Q13405 166 aaKnown RBP12.93□□□□□ -0.34
SGCE-202ENST00000415788 PON3Q15166 354 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 PGBD2Q6P3X8 592 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 SLC43A2Q8N370 569 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 WNT2BQ93097 391 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 SLC25A36Q96CQ1 311 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 TRIB1Q96RU8 372 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 DCLRE1CQ96SD1 692 aaKnown RBP12.93□□□□□ -0.34
SGCE-202ENST00000415788 C20orf141Q9NUB4 165 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 TINAGQ9UJW2 476 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 RALYQ9UKM9 306 aaKnown RBP12.93□□□□□ -0.34
SGCE-202ENST00000415788 B3GALT5Q9Y2C3 310 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 DNAJC13O75165 2243 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 FAM208BQ5VWN6 2430 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 IGSF10Q6WRI0 2623 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 SHANK1Q9Y566 2161 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 E9PLN8 166 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 OR7A10O76100 309 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 ETV1P50549 477 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 ZBTB37Q5TC79 503 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 TMPRSS11FQ6ZWK6 438 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 ADPRHL1Q8NDY3 354 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 MOGAT1Q96PD6 335 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 TM9SF2Q99805 663 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 VKORC1Q9BQB6 163 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 PRRG4Q9BZD6 226 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 MCUBQ9NWR8 336 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 NLKQ9UBE8 527 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 OSGIN2Q9Y236 505 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 SPEF1Q9Y4P9 236 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 AUP1Q9Y679 476 aa12.93□□□□□ -0.34
SGCE-202ENST00000415788 ZFYVE26Q68DK2 2539 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 INMT-MINDY4F8WBC2 141 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 AKR7A2O43488 359 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 PIP5K1CO60331 668 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 VAMP5O95183 116 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 SOX14O95416 240 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 HIST1H2ABP04908 130 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 ASAH2BP0C7U1 165 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 OMPP47874 163 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
SGCE-202ENST00000415788 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
SGCE-202ENST00000415788 RNPS1Q15287 305 aaKnown RBP12.92□□□□□ -0.34
SGCE-202ENST00000415788 TMEM211Q6ICI0 200 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 OR2A2Q6IF42 318 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 C1orf94Q6P1W5 598 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 H1FNTQ75WM6 255 aaPredicted RBP12.92□□□□□ -0.34
SGCE-202ENST00000415788 FCRLAQ7L513 359 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 HIST3H2AQ7L7L0 130 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 P4HA3Q7Z4N8 544 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 UBE2J2Q8N2K1 259 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 ANKK1Q8NFD2 765 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 OR5J2Q8NH18 312 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 FNDC9Q8TBE3 224 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 RNF128Q8TEB7 428 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 HIST1H2ACQ93077 130 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 UPRTQ96BW1 309 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 DNAJA3Q96EY1 480 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 ZNF582Q96NG8 517 aaPredicted RBP12.92□□□□□ -0.34
SGCE-202ENST00000415788 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 RANBP3Q9H6Z4 567 aaPredicted RBP12.92□□□□□ -0.34
SGCE-202ENST00000415788 GP6Q9HCN6 339 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 TVP23BQ9NYZ1 205 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 COMMD3Q9UBI1 195 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 EIF3KQ9UBQ5 218 aaKnown RBP12.92□□□□□ -0.34
SGCE-202ENST00000415788 FAM215AQ9Y5M1 114 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 CDH10Q9Y6N8 788 aa12.92□□□□□ -0.34
SGCE-202ENST00000415788 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
SGCE-202ENST00000415788 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
SGCE-202ENST00000415788 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
SGCE-202ENST00000415788 AQP7P3A6NL99 342 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 CASKO14936 926 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 SMAD9O15198 467 aaKnown RBP12.91□□□□□ -0.34
SGCE-202ENST00000415788 TLX2O43763 284 aaPredicted RBP12.91□□□□□ -0.34
SGCE-202ENST00000415788 AKR7A3O95154 331 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 SAGP10523 405 aaPredicted RBP12.91□□□□□ -0.34
SGCE-202ENST00000415788 FUT1P19526 365 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 GRPRP30550 384 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 TIMP3P35625 211 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 LTBQ06643 244 aa12.91□□□□□ -0.34
SGCE-202ENST00000415788 IL18Q14116 193 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms