RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ROM1Q03395 351 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 GLT8D1Q68CQ7 371 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 CBLN3Q6UW01 205 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 PDZD9Q8IXQ8 264 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 SLC22A18ASQ8N1D0 253 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 AVL9Q8NBF6 648 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 ZNF563Q8TA94 476 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 DUSP19Q8WTR2 217 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 TSEN15Q8WW01 171 aaKnown RBP8.84□□□□□ -0.99
CD44-206ENST00000415148 ATOH1Q92858 354 aaPredicted RBP8.84□□□□□ -0.99
CD44-206ENST00000415148 WNT2BQ93097 391 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 TAAR8Q969N4 342 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 PPP1R14AQ96A00 147 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 POTEKPQ9BYX7 375 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 SLC25A32Q9H2D1 315 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 ZC4H2Q9NQZ6 224 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 DUX4Q9UBX2 424 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 CYB5R1Q9UHQ9 305 aa8.84□□□□□ -0.99
CD44-206ENST00000415148 TRAV36DV7A0A075B6V5 113 aa8.83□□□□□ -1
CD44-206ENST00000415148 A0A0D9SG52 128 aa8.83□□□□□ -1
CD44-206ENST00000415148 SPTY2D1-AS1A0A0U1RR47 76 aa8.83□□□□□ -1
CD44-206ENST00000415148 MEGF11A6BM72 1044 aa8.83□□□□□ -1
CD44-206ENST00000415148 FRG2CA6NGY1 282 aa8.83□□□□□ -1
CD44-206ENST00000415148 D6RAR5 112 aa8.83□□□□□ -1
CD44-206ENST00000415148 XKRYO14609 159 aa8.83□□□□□ -1
CD44-206ENST00000415148 KCNAB3O43448 404 aa8.83□□□□□ -1
CD44-206ENST00000415148 SDC3O75056 442 aa8.83□□□□□ -1
CD44-206ENST00000415148 ITGA5P08648 1049 aa8.83□□□□□ -1
CD44-206ENST00000415148 CTSEP14091 401 aa8.83□□□□□ -1
CD44-206ENST00000415148 CCR4P51679 360 aa8.83□□□□□ -1
CD44-206ENST00000415148 LBX1P52954 281 aa8.83□□□□□ -1
CD44-206ENST00000415148 SLC37A1P57057 533 aa8.83□□□□□ -1
CD44-206ENST00000415148 SRSF4Q08170 494 aaKnown RBP8.83□□□□□ -1
CD44-206ENST00000415148 FGL1Q08830 312 aa8.83□□□□□ -1
CD44-206ENST00000415148 BEX5Q5H9J7 111 aa8.83□□□□□ -1
CD44-206ENST00000415148 LY6G6FQ5SQ64 297 aa8.83□□□□□ -1
CD44-206ENST00000415148 SLC18B1Q6NT16 456 aa8.83□□□□□ -1
CD44-206ENST00000415148 KCTD18Q6PI47 426 aaPredicted RBP8.83□□□□□ -1
CD44-206ENST00000415148 LRRC69Q6ZNQ3 347 aa8.83□□□□□ -1
CD44-206ENST00000415148 GATSQ8NAP1 163 aa8.83□□□□□ -1
CD44-206ENST00000415148 TNFAIP8L1Q8WVP5 186 aa8.83□□□□□ -1
CD44-206ENST00000415148 FOXN4Q96NZ1 517 aa8.83□□□□□ -1
CD44-206ENST00000415148 AMELYQ99218 206 aa8.83□□□□□ -1
CD44-206ENST00000415148 SLC38A3Q99624 504 aa8.83□□□□□ -1
CD44-206ENST00000415148 NPAS1Q99742 590 aa8.83□□□□□ -1
CD44-206ENST00000415148 SYT4Q9H2B2 425 aa8.83□□□□□ -1
CD44-206ENST00000415148 TCEAL2Q9H3H9 227 aaPredicted RBP8.83□□□□□ -1
CD44-206ENST00000415148 EXO5Q9H790 373 aa8.83□□□□□ -1
CD44-206ENST00000415148 ELOVL3Q9HB03 270 aa8.83□□□□□ -1
CD44-206ENST00000415148 FBXO4Q9UKT5 387 aa8.83□□□□□ -1
CD44-206ENST00000415148 B9D1Q9UPM9 204 aa8.83□□□□□ -1
CD44-206ENST00000415148 DOCK8Q8NF50 2099 aa8.83□□□□□ -1
CD44-206ENST00000415148 C17orf105B2RV13 164 aa8.83□□□□□ -1
CD44-206ENST00000415148 EIF4E2O60573 245 aaKnown RBP8.83□□□□□ -1
CD44-206ENST00000415148 SEMA4FO95754 770 aa8.83□□□□□ -1
CD44-206ENST00000415148 CD3DP04234 171 aa8.83□□□□□ -1
CD44-206ENST00000415148 LIPCP11150 499 aa8.83□□□□□ -1
CD44-206ENST00000415148 FSTP19883 344 aa8.83□□□□□ -1
CD44-206ENST00000415148 CXCR1P25024 350 aa8.83□□□□□ -1
CD44-206ENST00000415148 CCKBRP32239 447 aa8.83□□□□□ -1
CD44-206ENST00000415148 RORAP35398 523 aa8.83□□□□□ -1
CD44-206ENST00000415148 BLKP51451 505 aa8.83□□□□□ -1
CD44-206ENST00000415148 CCR5P51681 352 aa8.83□□□□□ -1
CD44-206ENST00000415148 CAPZA1P52907 286 aa8.83□□□□□ -1
CD44-206ENST00000415148 DCAF7P61962 342 aa8.83□□□□□ -1
CD44-206ENST00000415148 ARHGAP40Q5TG30 622 aa8.83□□□□□ -1
CD44-206ENST00000415148 ASPHD2Q6ICH7 369 aa8.83□□□□□ -1
CD44-206ENST00000415148 TMEM205Q6UW68 189 aa8.83□□□□□ -1
CD44-206ENST00000415148 MAMDC2Q7Z304 686 aaPredicted RBP8.83□□□□□ -1
CD44-206ENST00000415148 PM20D2Q8IYS1 436 aa8.83□□□□□ -1
CD44-206ENST00000415148 GABRG1Q8N1C3 465 aa8.83□□□□□ -1
CD44-206ENST00000415148 RELTQ969Z4 430 aa8.83□□□□□ -1
CD44-206ENST00000415148 PTX4Q96A99 478 aa8.83□□□□□ -1
CD44-206ENST00000415148 MMABQ96EY8 250 aaPredicted RBP8.83□□□□□ -1
CD44-206ENST00000415148 ZNF75AQ96N20 296 aa8.83□□□□□ -1
CD44-206ENST00000415148 ZNF587Q96SQ5 575 aaPredicted RBP8.83□□□□□ -1
CD44-206ENST00000415148 DNTTIP1Q9H147 329 aa8.83□□□□□ -1
CD44-206ENST00000415148 ATG5Q9H1Y0 275 aa8.83□□□□□ -1
CD44-206ENST00000415148 BARX1Q9HBU1 254 aaPredicted RBP8.83□□□□□ -1
CD44-206ENST00000415148 TMEM138Q9NPI0 162 aa8.83□□□□□ -1
CD44-206ENST00000415148 CKLFQ9UBR5 152 aa8.83□□□□□ -1
CD44-206ENST00000415148 PLCL2Q9UPR0 1127 aa8.83□□□□□ -1
CD44-206ENST00000415148 A0A1W2PQD3 144 aa8.82□□□□□ -1
CD44-206ENST00000415148 DOK2O60496 412 aa8.82□□□□□ -1
CD44-206ENST00000415148 CD8AP01732 235 aa8.82□□□□□ -1
CD44-206ENST00000415148 CD2P06729 351 aa8.82□□□□□ -1
CD44-206ENST00000415148 MGMTP16455 207 aa8.82□□□□□ -1
CD44-206ENST00000415148 IGFBP3P17936 291 aaPredicted RBP8.82□□□□□ -1
CD44-206ENST00000415148 CD96P40200 585 aa8.82□□□□□ -1
CD44-206ENST00000415148 RPL27P61353 136 aaKnown RBP8.82□□□□□ -1
CD44-206ENST00000415148 DEFA5Q01523 94 aa8.82□□□□□ -1
CD44-206ENST00000415148 MEP1BQ16820 701 aa8.82□□□□□ -1
CD44-206ENST00000415148 C4orf46Q504U0 113 aa8.82□□□□□ -1
CD44-206ENST00000415148 LPCAT3Q6P1A2 487 aa8.82□□□□□ -1
CD44-206ENST00000415148 TMEM92Q6UXU6 159 aa8.82□□□□□ -1
CD44-206ENST00000415148 NDUFAF7Q7L592 441 aa8.82□□□□□ -1
CD44-206ENST00000415148 ZNF761Q86XN6 746 aaPredicted RBP8.82□□□□□ -1
CD44-206ENST00000415148 C12orf45Q8N5I9 185 aaPredicted RBP8.82□□□□□ -1
CD44-206ENST00000415148 PTPMT1Q8WUK0 201 aaPredicted RBP8.82□□□□□ -1
CD44-206ENST00000415148 SEH1LQ96EE3 360 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms