RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SEC16AO15027 2179 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TMEM212A6NML5 194 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 H0YIG0 161 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 SMAD9O15198 467 aaKnown RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 ANXA2P07355 339 aaKnown RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 PNMTP11086 282 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 ICAM2P13598 275 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 PPP3CBP16298 524 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 AKT2P31751 481 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 AP3S2P59780 193 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 ARSKQ6UWY0 536 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TFAP2EQ6VUC0 442 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 OVCH2Q7RTZ1 564 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 ZNF676Q8N7Q3 588 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 RELL2Q8NC24 303 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 POFUT1Q9H488 388 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 APMAPQ9HDC9 416 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 PRMT8Q9NR22 394 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 TAS2R4Q9NYW5 299 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 PIAS3Q9Y6X2 628 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 SLC17A2O00624 439 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TMEM127O75204 238 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TACSTD2P09758 323 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 THEGLP0DJG4 465 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 CCKBRP32239 447 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 OR1D4P47884 311 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 PSMD4P55036 377 aaKnown RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 ACKR1Q16570 336 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TMEM225Q6GV28 225 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 CATSPERDQ86XM0 798 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 KDM8Q8N371 416 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 GPR148Q8TDV2 347 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 RNF128Q8TEB7 428 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 ST8SIA4Q92187 359 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 MRPS24Q96EL2 167 aaKnown RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 SLC41A2Q96JW4 573 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 GAL3ST1Q99999 423 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 C12orf10Q9HB07 376 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 FBXL2Q9UKC9 423 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 CELSR3Q9NYQ7 3312 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 WDFY4Q6ZS81 3184 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 A0A1B0GTI1 187 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 KCNAB3O43448 404 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 TSPAN2O60636 221 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 RBBP9O75884 186 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 HPP00738 406 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 IFNA16P05015 189 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 PPICP45877 212 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 RABIFP47224 123 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 HSD17B7P56937 341 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 SORDQ00796 357 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 SQSTM1Q13501 440 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 CCINQ13939 588 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 UBXN2BQ14CS0 331 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 EMC4Q5J8M3 183 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 COL13A1Q5TAT6 717 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 GABRG1Q8N1C3 465 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 PAQR4Q8N4S7 273 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 ZNF417Q8TAU3 575 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 DUSP19Q8WTR2 217 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 FBXW5Q969U6 566 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 ZNF775Q96BV0 537 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 OR11A1Q9GZK7 315 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 G6PC2Q9NQR9 355 aa8.86□□□□□ -0.99
SS18-203ENST00000415083 AKAP7Q9P0M2 348 aaPredicted RBP8.86□□□□□ -0.99
SS18-203ENST00000415083 FITM1A5D6W6 292 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 SOX1O00570 391 aaPredicted RBP8.85□□□□□ -0.99
SS18-203ENST00000415083 GTF2F2P13984 249 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 LTBRP36941 435 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 ROM1Q03395 351 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 CFHR1Q03591 330 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 ARHGAP40Q5TG30 622 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 C16orf47Q6ZP98 133 aaPredicted RBP8.85□□□□□ -0.99
SS18-203ENST00000415083 FAM220AQ7Z4H9 259 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 ZNF227Q86WZ6 799 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 BVESQ8NE79 360 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 OR4S1Q8NGB4 309 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 EDEM2Q9BV94 578 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 PNO1Q9NRX1 252 aaKnown RBP8.85□□□□□ -0.99
SS18-203ENST00000415083 LRP12Q9Y561 859 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 FXYD6-FXYD2A0A087WZ82 144 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 PRSS37A4D1T9 235 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 PRAMEF26H0Y7S4 382 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 MELTFP08582 738 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 ACHEP22303 614 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 NUP62P37198 522 aaPredicted RBP8.85□□□□□ -0.99
SS18-203ENST00000415083 CAPZBP47756 277 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 DLX5P56178 289 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 ATPAF1Q5TC12 328 aaPredicted RBP8.85□□□□□ -0.99
SS18-203ENST00000415083 NDUFAF7Q7L592 441 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 OR4D6Q8NGJ1 314 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 OR1J2Q8NGS2 313 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 ABHD6Q9BV23 337 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 LAT2Q9GZY6 243 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 FXYD6Q9H0Q3 95 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 VSX1Q9NZR4 365 aaPredicted RBP8.85□□□□□ -0.99
SS18-203ENST00000415083 CD207Q9UJ71 328 aa8.85□□□□□ -0.99
SS18-203ENST00000415083 CYP8B1Q9UNU6 501 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms