RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FOLR1P15328 257 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TSPAN7P41732 249 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
PTPRF-205ENST00000414879 COX15Q7KZN9 410 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF610Q8N9Z0 462 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TOMM40LQ969M1 308 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 MIB2Q96AX9 1013 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 OR5M11Q96RB7 305 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 SARGQ9BW04 601 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 SLC22A11Q9NSA0 550 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 PCDHGA1Q9Y5H4 931 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TRPM7Q96QT4 1865 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 A0A1W2PQ09 198 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 CD300LBA8K4G0 201 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 P2RY10O00398 339 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TSPAN9O75954 239 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 PSMB1P20618 241 aaKnown RBP10.88□□□□□ -0.67
PTPRF-205ENST00000414879 IL3RAP26951 378 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 IL13RA1P78552 427 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 C12orf73Q69YU5 71 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 Q6ZTK2 550 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 PHC2Q8IXK0 858 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 OR2Y1Q8NGV0 311 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 C7orf34Q96L11 122 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 A4GNTQ9UNA3 340 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TOR1AO14656 332 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 OR7C1O76099 320 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SLC14A1Q13336 389 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF74Q16587 644 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PMS2CLQ68D20 193 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SLC25A46Q96AG3 418 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 CTSFQ9UBX1 484 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 R4GMQ9 66 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SELENOFO60613 162 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SHC1P29353 583 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SHBQ15464 509 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 GALNT11Q8NCW6 608 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 OR52N5Q8NH56 324 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SMIM19Q96E16 107 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 FAM117AQ9C073 453 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 EEF1E1-BLOC1S5C9J1V9 151 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PRAMEF4O60810 478 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 CHRNB4P30926 498 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 RBP2P50120 134 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 RHEBQ15382 184 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PRTGQ2VWP7 1150 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 LHFPL2Q6ZUX7 228 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 LGALS14Q8TCE9 139 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 OR14A2Q96R54 314 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 POLE4Q9NR33 117 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
PTPRF-205ENST00000414879 TFP02787 698 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 HEXAP06865 529 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 GP1BAP07359 652 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SRD5A2P31213 254 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 EMDP50402 254 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SEC61A1P61619 476 aaKnown RBP10.87□□□□□ -0.67
PTPRF-205ENST00000414879 SSBP1Q04837 148 aaKnown RBP10.87□□□□□ -0.67
PTPRF-205ENST00000414879 NKG7Q16617 165 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 OR2T35Q8NGX2 323 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 DEDD2Q8WXF8 326 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 FGGYQ96C11 551 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 EHFQ9NZC4 300 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 PRELID3BQ9Y3B1 194 aa10.87□□□□□ -0.67
PTPRF-205ENST00000414879 ASPDHA6ND91 283 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ERGP11308 486 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 TBPP20226 339 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ATXN7L3Q14CW9 347 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 AGAP6Q5VW22 663 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ZNF585AQ6P3V2 769 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 C17orf47Q8NEP4 570 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ZCCHC4Q9H5U6 513 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 GLRX2Q9NS18 164 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 REV1Q9UBZ9 1251 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 SLC22A20A6NK97 555 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 CTDSP2O14595 271 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 CXCL13O43927 109 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 KNG1P01042 644 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 BLVRBP30043 206 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 DDOSTP39656 456 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 RAD52P43351 418 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 CLDN15P56746 228 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 TIAL1Q01085 375 aaKnown RBP eCLIP10.86□□□□□ -0.673e-6■■■□□ 14.6
PTPRF-205ENST00000414879 MFGE8Q08431 387 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 OLIG3Q7RTU3 272 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 PDZD9Q8IXQ8 264 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 PRSS35Q8N3Z0 413 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 ATF6BQ99941 703 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 BARHL1Q9BZE3 327 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-205ENST00000414879 SLA2Q9H6Q3 261 aa10.86□□□□□ -0.67
PTPRF-205ENST00000414879 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms