RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 ZC3HC1Q86WB0 502 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 LYSMD2Q8IV50 215 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 UEVLDQ8IX04 471 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ZC3H3Q8IXZ2 948 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 KLHDC8AQ8IYD2 350 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SYS1Q8N2H4 156 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 NAT16Q8N8M0 369 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 CDRT4Q8N9R6 151 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ST6GALNAC3Q8NDV1 305 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ZNF738Q8NE65 137 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 OR10G3Q8NGC4 313 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 OR13G1Q8NGZ3 307 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 OR4Q3Q8NH05 313 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 CASTOR1Q8WTX7 329 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SKA2Q8WVK7 121 aaPredicted RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 C1orf54Q8WWF1 131 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FAM3CQ92520 227 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 RPL3LQ92901 407 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 MCHR2Q969V1 340 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SNRNP40Q96DI7 357 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ZNF354BQ96LW1 612 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 Q96MT0 163 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 VSTM2LQ96N03 204 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ZNF75AQ96N20 296 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 MCRIP2Q9BUT9 160 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ABHD6Q9BV23 337 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 JAM3Q9BX67 310 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SUCNR1Q9BXA5 334 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 CADM1Q9BY67 442 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 CIPCQ9C0C6 399 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SEMA6AQ9H2E6 1030 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 MIXL1Q9H2W2 232 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 KCNK15Q9H427 330 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FAM83DQ9H4H8 585 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ALG9Q9H6U8 611 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 EFCAB1Q9HAE3 211 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ZBTB26Q9HCK0 441 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SLCO1B3Q9NPD5 702 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 TMEM9BQ9NQ34 198 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FSCN3Q9NQT6 498 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 C20orf141Q9NUB4 165 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 AP5S1Q9NUS5 200 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ACOXLQ9NUZ1 547 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SMOXQ9NWM0 555 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SIDT1Q9NXL6 827 aaKnown RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ARL15Q9NXU5 204 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 VNN3Q9NY84 501 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 PRR13Q9NZ81 148 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FOXJ2Q9P0K8 574 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 NTMQ9P121 344 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 SLC17A6Q9P2U8 582 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 GHRLQ9UBU3 117 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 IL17BQ9UHF5 180 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 ZNF391Q9UJN7 358 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FBXL4Q9UKA2 621 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FZD4Q9ULV1 537 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FOXJ3Q9UPW0 622 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 RCE1Q9Y256 329 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 FOXA2Q9Y261 457 aaPredicted RBP3.56□□□□□ -1.84
LINC01048-201ENST00000414480 MMP24Q9Y5R2 645 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 CDY1Q9Y6F8 540 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 WNT6Q9Y6F9 365 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 HSPE1-MOB4S4R3N1 261 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 MYH10P35580 1976 aa3.56□□□□□ -1.84
LINC01048-201ENST00000414480 KAT6AQ92794 2004 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TP53BP1Q12888 1972 aaPredicted RBP3.55□□□□□ -1.84
LINC01048-201ENST00000414480 PPIAL4EA0A075B759 164 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TBC1D3DA0A087WVF3 549 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TBC1D3IA0A087WXS9 549 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TBC1D3EA0A087X179 549 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TRBV11-1A0A0K0K1C0 115 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 A0A0U1RQF3 1178 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1B0GTI1 187 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1W2PPM1 405 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TBC1D3BA6NDS4 549 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 FAM90A7PA6NKC0 464 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 RNF212BA8MTL3 300 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 FAM90A22PA8MWA6 464 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 FAM90A12PA8MX19 464 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 FAM90A23PA8MXZ1 464 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 TBC1D3LB9A6J9 549 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 CLDN25C9JDP6 229 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 KLRF2D3W0D1 207 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 SLC17A3O00476 420 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 MAN2B1O00754 1011 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 DSCR3O14972 297 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 MSH4O15457 936 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 SYNGR3O43761 229 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 ENTPD6O75354 484 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 OR2F2O95006 317 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 S1PR2O95136 353 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 STBD1O95210 358 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 FARS2O95363 451 aaKnown RBP3.55□□□□□ -1.84
LINC01048-201ENST00000414480 GLUD1P00367 558 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 SLPIP03973 132 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 ARG1P05089 322 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 SCG5P05408 212 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 SERPINE2P07093 398 aa3.55□□□□□ -1.84
LINC01048-201ENST00000414480 CRYGBP07316 175 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms