RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 APEX1P27695 318 aaKnown RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 LAP3P28838 519 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 SDHAP31040 664 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 LIMS1P48059 325 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 EVX1P49640 407 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 LCN6P62502 163 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 KRR1Q13601 381 aaKnown RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 PABPC1L2AQ5JQF8 200 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 GPR139Q6DWJ6 353 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 SMARCD3Q6STE5 483 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 UNQ6126/PRO20091Q6UXV3 157 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 DPY19L2P2Q6ZN68 376 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 RINLQ6ZS11 566 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 ICA1LQ8NDH6 482 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 C10orf105Q8TEF2 133 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 C11orf40Q8WZ69 217 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 POP5Q969H6 163 aaKnown RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 NABP1Q96AH0 204 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 LRGUKQ96M69 825 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 SYT3Q9BQG1 590 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 MRPL37Q9BZE1 423 aaKnown RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 OR51B6Q9H340 312 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 RERGLQ9H628 205 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 EIF3KQ9UBQ5 218 aaKnown RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 IL20RAQ9UHF4 553 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 GPR160Q9UJ42 338 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 TIMM10BQ9Y5J6 103 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 IER3IP1Q9Y5U9 82 aa9.66□□□□□ -0.86
RFFL-204ENST00000414419 NSD1Q96L73 2696 aaPredicted RBP9.66□□□□□ -0.86
RFFL-204ENST00000414419 LOC390937A0A1W2PQ73 354 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 TMEM129A0AVI4 362 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 C12orf71A8MTZ7 269 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 SOCS2O14508 198 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 SNAP29O95721 258 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 DAOP14920 347 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 PCSK6P29122 969 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 GDI2P50395 445 aaKnown RBP9.65□□□□□ -0.86
RFFL-204ENST00000414419 UCP2P55851 309 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 PSG4Q00888 419 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 TRIM25Q14258 630 aaKnown RBP9.65□□□□□ -0.86
RFFL-204ENST00000414419 IQCCQ4KMZ1 466 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 MESTQ5EB52 335 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 FAM122BQ7Z309 247 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 ADCK1Q86TW2 530 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 ZCCHC24Q8N2G6 241 aaKnown RBP9.65□□□□□ -0.86
RFFL-204ENST00000414419 ZNF540Q8NDQ6 660 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 CPEB3Q8NE35 698 aaKnown RBP9.65□□□□□ -0.86
RFFL-204ENST00000414419 FANK1Q8TC84 345 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 BCAS4Q8TDM0 211 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 RASD2Q96D21 266 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 POM121Q96HA1 1249 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 GPX7Q96SL4 187 aaPredicted RBP9.65□□□□□ -0.86
RFFL-204ENST00000414419 BCL2L14Q9BZR8 327 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 NRIP3Q9NQ35 241 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 REV1Q9UBZ9 1251 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 FZR1Q9UM11 496 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 PRPF19Q9UMS4 504 aaKnown RBP9.65□□□□□ -0.86
RFFL-204ENST00000414419 NF1P21359 2839 aa9.65□□□□□ -0.86
RFFL-204ENST00000414419 C5orf49A4QMS7 147 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 TNFRSF11BO00300 401 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 SLC16A7O60669 478 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 KHDRBS3O75525 346 aaKnown RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 ZNF26P17031 533 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 HOXB4P17483 251 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 ATP6V1B2P21281 511 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 USF1P22415 310 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 FPR3P25089 353 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 NOS3P29474 1203 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 SLC6A6P31641 620 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 CENPAP49450 140 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 KLF3P57682 345 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 LOXL1Q08397 574 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 GGTLC2Q14390 218 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 MOGQ16653 247 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 NKPD1Q17RQ9 610 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 RFX4Q33E94 735 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 FAM98BQ52LJ0 330 aaKnown RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 LCN8Q6JVE9 175 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 DNM1P34Q6PK57 102 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 ARL9Q6T311 187 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 THSD4Q6ZMP0 1018 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 FOXL2NBQ6ZUU3 175 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 ZER1Q7Z7L7 766 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 SYT9Q86SS6 491 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 LRP11Q86VZ4 500 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 JAZF1Q86VZ6 243 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 PAQR4Q8N4S7 273 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 LINC00471Q8N535 108 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 OR1J1Q8NGS3 322 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 AKR7LQ8NHP1 331 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 SYNPRQ8TBG9 265 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 GNPDA2Q8TDQ7 276 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 SNX33Q8WV41 574 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 ERMAPQ96PL5 475 aaPredicted RBP9.64□□□□□ -0.87
RFFL-204ENST00000414419 FUZQ9BT04 418 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 WACQ9BTA9 647 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 IFT27Q9BW83 186 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 ZNF416Q9BWM5 594 aa9.64□□□□□ -0.87
RFFL-204ENST00000414419 OR2H1Q9GZK4 316 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms