RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 C22orf34Q6ZV56 151 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 HDDC2Q7Z4H3 204 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 BCDIN3DQ7Z5W3 292 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 WFDC8Q8IUA0 241 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 NPEPL1Q8NDH3 523 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 OR4K13Q8NH42 304 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 PTP4A1Q93096 173 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 ZHX1-C8orf76Q96EF9 292 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 RNFT2Q96EX2 444 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 C18orf12Q96KH6 178 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 HS3ST6Q96QI5 342 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 TSPAN32Q96QS1 320 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 NOX1Q9Y5S8 564 aa14.9□□□□□ -0.02
SCAMP4-204ENST00000414057 A0A1W2PNR3 127 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 A6NIZ1 184 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 FAM183AA6NL82 134 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 FAM171A2A8MVW0 826 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 C11orf98E9PRG8 122 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 MS4A18H0YCH9 400 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 CYTIPO60759 359 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 VAMP5O95183 116 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RAB36O95755 333 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RENP00797 406 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 SLC2A5P22732 501 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 OR2B6P58173 313 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RAP1BP61224 184 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RAP1AP62834 184 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 PIGFQ07326 219 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RASGEF1BQ0VAM2 473 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 IRF3Q14653 427 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 MS4A18Q3C1V0 323 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 SFRP5Q5T4F7 317 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ZNF704Q6ZNC4 412 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 SSX8Q7RTT4 187 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 NUFIP2Q7Z417 695 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 GPR141Q7Z602 305 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 LSRQ86X29 649 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 GABRG1Q8N1C3 465 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ARIH2OSQ8N7S6 290 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 SDR9C7Q8NEX9 313 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 HSD17B8Q92506 261 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RORBQ92753 470 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 OTULINQ96BN8 352 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RASD2Q96D21 266 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 LGALS12Q96DT0 336 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 PLPPR2Q96GM1 343 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 Q96M85 177 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 DDOQ99489 341 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 NAA11Q9BSU3 229 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 JAM3Q9BX67 310 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 NMNAT2Q9BZQ4 307 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ACOT13Q9NPJ3 140 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 SEC14L4Q9UDX3 406 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ZNF346Q9UL40 294 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 EXOGQ9Y2C4 368 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ABCA4P78363 2273 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ITPR3Q14573 2671 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 AQP7P3A6NL99 342 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 AHCYL1O43865 530 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 LOXP28300 417 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 NEDD8Q15843 81 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 Q5PR19 223 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 UBE2UQ5VVX9 321 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 LEG1Q6P5S2 330 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 SATL1Q86VE3 508 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 BBS1Q8NFJ9 593 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ZNF519Q8TB69 540 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 KISS1RQ969F8 398 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 MUL1Q969V5 352 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 S100PBPQ96BU1 408 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 NMNAT3Q96T66 252 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 TEAD3Q99594 435 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RACGAP1Q9H0H5 632 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 ESRP2Q9H6T0 727 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 EMC3Q9P0I2 261 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 MOKQ9UQ07 419 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 RASD1Q9Y272 281 aa14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 EXOSC1Q9Y3B2 195 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-204ENST00000414057 HRNRQ86YZ3 2850 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 IGHV3-15A0A0B4J1V0 119 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 ZNF724A8MTY0 619 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 ZNF99A8MXY4 864 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 AKR7A3O95154 331 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 MYL12AP19105 171 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 CENPAP49450 140 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 H3F3AP84243 136 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 KRTAP21-3Q3LHN1 58 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 KLHL12Q53G59 568 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 MESTQ5EB52 335 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 Q6ZT83 130 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 POMGNT2Q8NAT1 580 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 CYB561A3Q8NBI2 242 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 OR52I1Q8NGK6 324 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 TMEM171Q8WVE6 324 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 DNAJA3Q96EY1 480 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 OXGR1Q96P68 337 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 CXorf56Q9H5V9 222 aa14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 CHCHD3Q9NX63 227 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-204ENST00000414057 ERGIC3Q9Y282 383 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms