RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RPS27P42677 84 aaKnown RBP15.9■□□□□ 0.14
SDCBP-202ENST00000413219 CENPAP49450 140 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 ROM1Q03395 351 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 MEP1BQ16820 701 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 LRRC69Q6ZNQ3 347 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 ZNF627Q7L945 461 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 BPIFB2Q8N4F0 458 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 ADAMTS18Q8TE60 1221 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 HERVK_113Q902F9 699 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 PTX4Q96A99 478 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 BMFQ96LC9 184 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 PDCD10Q9BUL8 212 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 PRTFDC1Q9NRG1 225 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 NOP16Q9Y3C1 178 aaKnown RBP15.9■□□□□ 0.14
SDCBP-202ENST00000413219 LINC01553A4QN01 128 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 MEGF11A6BM72 1044 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 H0Y8X5 98 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 LDLRAD4O15165 306 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 OIP5O43482 229 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 NUDT21O43809 227 aaKnown RBP15.9■□□□□ 0.14
SDCBP-202ENST00000413219 SEC13P55735 322 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 SKP1P63208 163 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 TAF13Q15543 124 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 CD226Q15762 336 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 SLC18B1Q6NT16 456 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 ADGRE4PQ86SQ3 457 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 SLC25A42Q86VD7 318 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 ZNF615Q8N8J6 731 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 OR13C8Q8NGS7 320 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 LMF1Q96S06 567 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 GAREM1Q9H706 876 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 PRMT8Q9NR22 394 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-202ENST00000413219 CPNE7Q9UBL6 633 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 PRODH2Q9UF12 536 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 MSRAQ9UJ68 235 aa15.9■□□□□ 0.14
SDCBP-202ENST00000413219 ALOX12BO75342 701 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 IL2RAP01589 272 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 ZBTB25P24278 435 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 TACR3P29371 465 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 CCR4P51679 360 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 PHF19Q5T6S3 580 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 SPRED2Q7Z698 418 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 LYG2Q86SG7 212 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 OOSP2Q86WS3 158 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 ARMC10Q8N2F6 343 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 GATSQ8NAP1 163 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 PLPP7Q8NBV4 271 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 PHOSPHO1Q8TCT1 267 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 ASB5Q8WWX0 329 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 KTI12Q96EK9 354 aaPredicted RBP15.89■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF75AQ96N20 296 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 PRRT1Q99946 306 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 SLC22A13Q9Y226 551 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 CLDN16Q9Y5I7 305 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 HEATR5AQ86XA9 2040 aa15.89■□□□□ 0.13
SDCBP-202ENST00000413219 H7C2Y5 167 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 K7EQS6 105 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 CLDN4O14493 209 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 HCRTR1O43613 425 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 HLA-AP01891 365 aaKnown RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 HPGDP15428 266 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 NTSR1P30989 418 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 UBE2IP63279 158 aaKnown RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 PMPCAQ10713 525 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 ALG11Q2TAA5 492 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 GLYATL3Q5SZD4 288 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 NDUFAF7Q7L592 441 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 ZDHHC22Q8N966 263 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 PPP1R1CQ8WVI7 109 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 NARS2Q96I59 477 aaKnown RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 GABRG3Q99928 467 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 PLA2G2FQ9BZM2 168 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 FBXO4Q9UKT5 387 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 A0A0A6YYC8 382 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 TMEM218A2RU14 115 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 I3L1I5 382 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 SULT2B1O00204 365 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 XKRYO14609 159 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 SIGLEC5O15389 551 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF264O43296 627 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 GPANK1O95872 356 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 RORAP35398 523 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 CASRP41180 1078 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 HOXA1P49639 335 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 CAPZA1P52907 286 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 SIGLEC14Q08ET2 396 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 ELOCQ15369 112 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 PRTGQ2VWP7 1150 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 FAHD2BQ6P2I3 314 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 KCTD18Q6PI47 426 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-202ENST00000413219 CATSPERDQ86XM0 798 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 SVBPQ8N300 66 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 TAAR8Q969N4 342 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 FAHD2AQ96GK7 314 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 SLC6A7Q99884 636 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 ADAM19Q9H013 955 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 SLC39A1Q9NY26 324 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 PCDHB10Q9UN67 800 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 B9D1Q9UPM9 204 aa15.88■□□□□ 0.13
SDCBP-202ENST00000413219 NUDT19A8MXV4 375 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms