RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 THOC6Q86W42 341 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 KLHDC8BQ8IXV7 354 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 DBF4BQ8NFT6 615 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SPACA9Q96E40 222 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NEIL1Q96FI4 390 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 HSD3B7Q9H2F3 369 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NSUN3Q9H649 340 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NTN4Q9HB63 628 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 UTS2RQ9UKP6 389 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR1A2Q9Y585 309 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 AKR7A2O43488 359 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 HOXC4P09017 264 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 LGALS1P09382 135 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 DLK1P80370 383 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 APOFQ13790 326 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GUCA2BQ16661 112 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PARP15Q460N3 678 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CAMKMTQ7Z624 323 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 IL22RA1Q8N6P7 574 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 UBAC2Q8NBM4 344 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NUDCD2Q8WVJ2 157 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OIT3Q8WWZ8 545 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ADAMTS14Q8WXS8 1223 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 H1FXQ92522 213 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 RPEQ96AT9 228 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SLCO4A1Q96BD0 722 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SSBP4Q9BWG4 385 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SLC52A2Q9HAB3 445 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 TMPRSS4Q9NRS4 437 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SIRT5Q9NXA8 310 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FAM157AC9JC47 383 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CHST1O43916 411 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF737O75373 536 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NAPSAO96009 420 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SPATA31C1P0DKV0 1188 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 VPREB1P12018 145 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NID1P14543 1247 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NOS1P29475 1434 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 HTRA3P83110 453 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 GHRHRQ02643 423 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 COL19A1Q14993 1142 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 AGBL4Q5VU57 503 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SYT9Q86SS6 491 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR1K1Q8NGR3 316 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR2Y1Q8NGV0 311 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ADAMTS16Q8TE57 1224 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CREB3L4Q8TEY5 395 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR8B2Q96RD0 313 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 IL21Q9HBE4 155 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 IL17BQ9UHF5 180 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR2W1Q9Y3N9 320 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 METP08581 1390 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR2A25A4D2G3 310 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 LINC00862A6NCI5 91 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NUPL2O15504 423 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SLC25A17O43808 307 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NKX2-1P43699 371 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 AQP4P55087 323 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF85Q03923 595 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 NKAIN1Q4KMZ8 207 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 LINGO4Q6UY18 593 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 C9orf40Q8IXQ3 194 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR51A2Q8NGJ7 313 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR51G2Q8NGK0 314 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR14C36Q8NHC7 312 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CELF6Q96J87 481 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ACO2Q99798 780 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 RPRD2Q5VT52 1461 aaKnown RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SPATA31A7Q8IWB4 1347 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PLPP1O14494 284 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 MT-CYBP00156 380 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PRSS56P0CW18 603 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PCP4P48539 62 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FOXO1Q12778 655 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PDGFRLQ15198 375 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 MLF2Q15773 248 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 MICBQ29980 383 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF789Q5FWF6 425 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FBXO48Q5FWF7 155 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ABHD17BQ5VST6 288 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 LDB1Q86U70 411 aaPredicted RBP4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FAM124AQ86V42 546 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 ADGRG5Q8IZF4 528 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CSNK1A1LQ8N752 337 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 SDR9C7Q8NEX9 313 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR5M9Q8NGP3 310 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR1L4Q8NGR5 311 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OR6K2Q8NGY2 324 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 PYCR2Q96C36 320 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 RTL8AQ9BWD3 113 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 TTYH3Q9C0H2 523 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OLAHQ9NV23 265 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 OAZ3Q9UMX2 235 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV41A0A0B4J266 112 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 KIR2DS1A0A191URI9 304 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 IGSF23A1L1A6 192 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 FITM1A5D6W6 292 aa4.24□□□□□ -1.73
PTPN13-202ENST00000411767 CLDN34H7C241 214 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms